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Cannot access R variables from Python when running from command line #914
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Do you see this with the development version of |
I just tested it, it does appear to be fixed in the current dev version (1.18-9000). Thank you! |
Great, thanks! I'll try to get a new version of |
Awesome, thanks for the super quick turnaround |
reticulate 1.19 is now on CRAN. |
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…ate makes the passthrough between r and python see rstudio/reticulate#914
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* Relec ka 2210 (#167) * coquilles webscraping * coquilles regex * relecture du cours et TP sur git KA * relecture KA du TP sur les API * Update content/course/manipulation/04a_webscraping_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd Co-authored-by: Lino Galiana <33896139+linogaliana@users.noreply.github.com> * Automated changes * Automated changes * Automated changes * plein de détails * encore des exemples * ajoute détails * Automated changes * Automated changes * limite taille print * update * Automated changes * Automated changes * ajoute une carte leaflet * Automated changes * Automated changes * corrige plot manquant * afficher folium * print status * Automated changes * Automated changes * Automated changes * stylise la carte * Automated changes * Automated changes * customize carte * Automated changes * Automated changes * citer XD * afficher l'image * retire de la liste * Automated changes * Automated changes * Automated changes * Automated changes * Automated changes * Stupid idea to give a variable the name "r" since this is how reticulate makes the passthrough between r and python see rstudio/reticulate#914 * Automated changes * Automated changes * retire image * Automated changes * Automated changes * asis * Automated changes * Automated changes * test compil partie git * une petite intro * détails * on arrange * copier coller utilitr * note authent https * des détails supplémentaires * eval FALSE * clean * premiers elements * ajoute des éléments * capture écran * des modifs * ajoute image git * explications * ajoute option store * plus de modifs * reorg * clean * partie solo finie * ajoute éléments dans la partie cours * ajout header jupytext ! * Automated changes * Automated changes * update fichiers * mef markdown * change emplacement * Automated changes * mef * Automated changes * Automated changes * Automated changes * Automated changes * typo * Automated changes * Automated changes * affiche image masquée * Automated changes * Automated changes * révise partie cadavre exquis * Automated changes * Automated changes * corrige typo * shell * Automated changes * Automated changes * Automated changes * cette image est mieux * Automated changes * Automated changes Co-authored-by: Kim A <kim.antunez@ensae.fr> Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
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* Relec ka 2210 (#167) * coquilles webscraping * coquilles regex * relecture du cours et TP sur git KA * relecture KA du TP sur les API * Update content/course/manipulation/04a_webscraping_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd Co-authored-by: Lino Galiana <33896139+linogaliana@users.noreply.github.com> * Automated changes * Automated changes * Automated changes * plein de détails * encore des exemples * ajoute détails * Automated changes * Automated changes * limite taille print * update * Automated changes * Automated changes * ajoute une carte leaflet * Automated changes * Automated changes * corrige plot manquant * afficher folium * print status * Automated changes * Automated changes * Automated changes * stylise la carte * Automated changes * Automated changes * customize carte * Automated changes * Automated changes * citer XD * afficher l'image * retire de la liste * Automated changes * Automated changes * Automated changes * Automated changes * Automated changes * Stupid idea to give a variable the name "r" since this is how reticulate makes the passthrough between r and python see rstudio/reticulate#914 * Automated changes * Automated changes * retire image * Automated changes * Automated changes * asis * Automated changes * Automated changes * test compil partie git * une petite intro * détails * on arrange * copier coller utilitr * note authent https * des détails supplémentaires * eval FALSE * clean * premiers elements * ajoute des éléments * capture écran * des modifs * ajoute image git * explications * ajoute option store * plus de modifs * reorg * clean * partie solo finie * ajoute éléments dans la partie cours * ajout header jupytext ! * Automated changes * Automated changes * update fichiers * mef markdown * change emplacement * Automated changes * mef * Automated changes * Automated changes * Automated changes * Automated changes * typo * Automated changes * Automated changes * affiche image masquée * Automated changes * Automated changes * révise partie cadavre exquis * Automated changes * Automated changes * corrige typo * shell * Automated changes * Automated changes * Automated changes * cette image est mieux * Automated changes * Automated changes Co-authored-by: Kim A <kim.antunez@ensae.fr> Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
linogaliana
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* Relec ka 2210 (#167) * coquilles webscraping * coquilles regex * relecture du cours et TP sur git KA * relecture KA du TP sur les API * Update content/course/manipulation/04a_webscraping_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd Co-authored-by: Lino Galiana <33896139+linogaliana@users.noreply.github.com> * Automated changes * Automated changes * Automated changes * plein de détails * encore des exemples * ajoute détails * Automated changes * Automated changes * limite taille print * update * Automated changes * Automated changes * ajoute une carte leaflet * Automated changes * Automated changes * corrige plot manquant * afficher folium * print status * Automated changes * Automated changes * Automated changes * stylise la carte * Automated changes * Automated changes * customize carte * Automated changes * Automated changes * citer XD * afficher l'image * retire de la liste * Automated changes * Automated changes * Automated changes * Automated changes * Automated changes * Stupid idea to give a variable the name "r" since this is how reticulate makes the passthrough between r and python see rstudio/reticulate#914 * Automated changes * Automated changes * retire image * Automated changes * Automated changes * asis * Automated changes * Automated changes * test compil partie git * une petite intro * détails * on arrange * copier coller utilitr * note authent https * des détails supplémentaires * eval FALSE * clean * premiers elements * ajoute des éléments * capture écran * des modifs * ajoute image git * explications * ajoute option store * plus de modifs * reorg * clean * partie solo finie * ajoute éléments dans la partie cours * ajout header jupytext ! * Automated changes * Automated changes * update fichiers * mef markdown * change emplacement * Automated changes * mef * Automated changes * Automated changes * Automated changes * Automated changes * typo * Automated changes * Automated changes * affiche image masquée * Automated changes * Automated changes * révise partie cadavre exquis * Automated changes * Automated changes * corrige typo * shell * Automated changes * Automated changes * Automated changes * cette image est mieux * Automated changes * Automated changes Co-authored-by: Kim A <kim.antunez@ensae.fr> Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
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* Relec ka 2210 (#167) * coquilles webscraping * coquilles regex * relecture du cours et TP sur git KA * relecture KA du TP sur les API * Update content/course/manipulation/04a_webscraping_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd Co-authored-by: Lino Galiana <33896139+linogaliana@users.noreply.github.com> * Automated changes * Automated changes * Automated changes * plein de détails * encore des exemples * ajoute détails * Automated changes * Automated changes * limite taille print * update * Automated changes * Automated changes * ajoute une carte leaflet * Automated changes * Automated changes * corrige plot manquant * afficher folium * print status * Automated changes * Automated changes * Automated changes * stylise la carte * Automated changes * Automated changes * customize carte * Automated changes * Automated changes * citer XD * afficher l'image * retire de la liste * Automated changes * Automated changes * Automated changes * Automated changes * Automated changes * Stupid idea to give a variable the name "r" since this is how reticulate makes the passthrough between r and python see rstudio/reticulate#914 * Automated changes * Automated changes * retire image * Automated changes * Automated changes * asis * Automated changes * Automated changes * test compil partie git * une petite intro * détails * on arrange * copier coller utilitr * note authent https * des détails supplémentaires * eval FALSE * clean * premiers elements * ajoute des éléments * capture écran * des modifs * ajoute image git * explications * ajoute option store * plus de modifs * reorg * clean * partie solo finie * ajoute éléments dans la partie cours * ajout header jupytext ! * Automated changes * Automated changes * update fichiers * mef markdown * change emplacement * Automated changes * mef * Automated changes * Automated changes * Automated changes * Automated changes * typo * Automated changes * Automated changes * affiche image masquée * Automated changes * Automated changes * révise partie cadavre exquis * Automated changes * Automated changes * corrige typo * shell * Automated changes * Automated changes * Automated changes * cette image est mieux * Automated changes * Automated changes Co-authored-by: Kim A <kim.antunez@ensae.fr> Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
linogaliana
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* Relec ka 2210 (#167) * coquilles webscraping * coquilles regex * relecture du cours et TP sur git KA * relecture KA du TP sur les API * Update content/course/manipulation/04a_webscraping_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd * Update content/course/manipulation/04c_API_TP.Rmd Co-authored-by: Lino Galiana <33896139+linogaliana@users.noreply.github.com> * Automated changes * Automated changes * Automated changes * plein de détails * encore des exemples * ajoute détails * Automated changes * Automated changes * limite taille print * update * Automated changes * Automated changes * ajoute une carte leaflet * Automated changes * Automated changes * corrige plot manquant * afficher folium * print status * Automated changes * Automated changes * Automated changes * stylise la carte * Automated changes * Automated changes * customize carte * Automated changes * Automated changes * citer XD * afficher l'image * retire de la liste * Automated changes * Automated changes * Automated changes * Automated changes * Automated changes * Stupid idea to give a variable the name "r" since this is how reticulate makes the passthrough between r and python see rstudio/reticulate#914 * Automated changes * Automated changes * retire image * Automated changes * Automated changes * asis * Automated changes * Automated changes * test compil partie git * une petite intro * détails * on arrange * copier coller utilitr * note authent https * des détails supplémentaires * eval FALSE * clean * premiers elements * ajoute des éléments * capture écran * des modifs * ajoute image git * explications * ajoute option store * plus de modifs * reorg * clean * partie solo finie * ajoute éléments dans la partie cours * ajout header jupytext ! * Automated changes * Automated changes * update fichiers * mef markdown * change emplacement * Automated changes * mef * Automated changes * Automated changes * Automated changes * Automated changes * typo * Automated changes * Automated changes * affiche image masquée * Automated changes * Automated changes * révise partie cadavre exquis * Automated changes * Automated changes * corrige typo * shell * Automated changes * Automated changes * Automated changes * cette image est mieux * Automated changes * Automated changes Co-authored-by: Kim A <kim.antunez@ensae.fr> Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
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The following code works from RStudio but not when using R from the command line and calling 'render' on an rMarkdown notebook.
When executing from RStudio it prints '2' as expected, but if I run R from the command line it fails with
Reticulate v1.16 works as expected, but versions 1.17 and 1.18 are broken. My guess is that it is related to this commit: fcd969e
Related Stack Overflow post (before I realised it was a version issue): https://stackoverflow.com/questions/65511458/reticulate-cant-access-r-variables-in-python-when-knitting-unless-running-in-rs
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