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full_length_model

Ryan edited this page Feb 9, 2018 · 9 revisions

Usage: modelmaker full_length_model -template <template pdb> -fragfiles <list of fragment files>
-fasta <fasta file> ?options?
Options:
-resstart <id of first residue> (default: $DefaultResStart)

An example of how to obtain full length models with ModelMaker from the tutorial is below:

modelmaker full_length_model -template rpn11_start_structure_288-306.pdb
-fragfiles {rpn11_18-306.frag9 rpn11_18-306.frag3} -fasta rpn11_18-306.fasta –resstart 18