Added release notes

saezlab · Mar 18, 2022 · 5c4e70d · 5c4e70d
1 parent 940797e
commit 5c4e70d
Show file tree

Hide file tree

Showing 3 changed files with 23 additions and 1 deletion.
diff --git a/decoupler/pre.py b/decoupler/pre.py
@@ -26,7 +26,7 @@ def extract(mat, use_raw=True, verbose=False, dtype=np.float32):
     Returns
     -------
     m : csr_matrix
-        Sparse matrix contianing molecular readouts or statistics.
+        Sparse matrix containing molecular readouts or statistics.
     r : ndarray
         Array of sample names.
     c : ndarray

diff --git a/docs/source/index.rst b/docs/source/index.rst
@@ -35,4 +35,5 @@ The data redistributed by OmniPath does not have a license, each original resour
    notebooks/msigdb
    notebooks/pseudobulk
    api
+   release_notes
    reference
diff --git a/docs/source/release_notes.rst b/docs/source/release_notes.rst
@@ -0,0 +1,21 @@
+Release notes
+=============
+
+1.1.0
+-----
+Bug fixes
+~~~~~~~~~
+- Fixed ``get_pseudobulk`` errors.
+- Fixed ``get_progeny`` to correctly return non duplicate entries.
+- Fixed ``run_viper`` parallelization error.
+- Fixed ``run_ora`` to correctly deal with random ties.
+
+Changes
+~~~~~~~~
+- ``get_dorothea`` now returns an ordered dataframe.
+- ``get_contrast`` now prints warnings instead of returning an empty dataframe.
+
+Additions
+~~~~~~~~~
+- Added ``get_top_targets`` util function.
+- Added ``format_contrast_results`` util function.