v1.0.5 #91
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v1.0.5 #91
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1.0.5 (25.02.2024)
Added ScSeqComm Method, implemented by @BaldanMatt (Scseqcomm dev #68)
Added functions to query a metabolite-receptor interactions database (MetalinksDB), including:
=>
li.rs.get_metalinksto get the database=>
li.rs.get_metalinks_valuesto get the distinct annotation values of the database=>
describe_metalinksto get a description of the databaseAdded a metabolite-mediated CCC tutorial in spatially-resolved multi-omics data (Metabolite-mediated CCC tutorial #45).
Changed hardcoded constants to be defined in _constants.py
Excluded CellChat from the default
rank_aggregatemethodFixed return logic of SpatialBivariate
li.mt.process_scoresis now exported toli.mtChanged the default
max_neighboursinli.ut.spatial_neighborsto 1/10 of the number of spots.