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Rich #47

Merged
merged 166 commits into from Jan 14, 2021
Merged

Rich #47

merged 166 commits into from Jan 14, 2021

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saforem2
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General improvements, rewrote logging methods to use Rich for better formatting.

  • Adds dynamic (trainable) step size eps for each separate x and v updates, seems to generally increase the total energy towards the middle of the trajectory but it remains unclear if this corresponds to an improvement in the tunneling rate
  • Adds methods for calculating autocorrelations of the topological charge, as well as notebooks for generating the plots
  • Updates to the writeup in doc/main.pdf
  • Will likely be last changes to writeup before public release of official draft

@saforem2
Updates to config.py
c29dce1
@saforem2
Updates to utils/
265cf3a
@saforem2
Updates to dynamics/
e648fef
@saforem2
Updates to train.py
cf5e3bb
@saforem2
Updates to test/test_training.py
4668cfb
@saforem2
Updates to doc/*
9f66c99
@saforem2
Updates to dynamics/*
f9390c5
@saforem2
Adds helper fn for getting intQ, sinQ to GaugeLattice
9244cfe
@saforem2
Updates to utils/plotting_utils.py
1920d00
@saforem2
Clean up utils/{training,inference}_utils.py
b507e10
@saforem2
Adds numpy json Encoder to utils/file_io.py
1912244
@saforem2
Updates to test/test_training.py
87c9213
@saforem2
Updates to bin/test_configs.json
8e6bc20
@saforem2
Updates to utils/data_containers.py
2e1dcd1
@saforem2
Adds notebooks/inference_from_thetaGPU.ipynb
f817c25
@saforem2
Replaces tf.gather(x, idxs) with x[idxs] in BaseDynamics
7c1c422
@saforem2
Replaces / with _ in var names in tf.keras.Model object
0d12f25
@saforem2
Updates to tests/test_training.py
49d2fc0
@saforem2
Adds mplstyle.use('fast') to utils/plotting_utils.py'
78f48b5
@saforem2
Wraps calls to plot_data() with timer
c086c2c
@saforem2
Explicitly close plots in utils/plotting_utils.py
cad2152
@saforem2
Wraps az.plot_trace() call in try/except block
236dad0
@saforem2
Adds bin/train_thetaGPU.sh
57f54ff
@saforem2
Updates to how beta is initialized
fdb8f6b
@saforem2
Ensure consistent (lowercase) names throughout
6fdc4ad
@saforem2
Updates to run_inference_from_log_dir() in utils/inference_utils.py
edeefad
@saforem2
Updates to run_inference_from_log_dir() in utils/inference_utils.py
277d3cd
@saforem2
Ensure directory exists before adding inference results to .csv file
72bcee5
@saforem2
Explicitly close plots in utils/data_containers.py
d690898
@saforem2
Updates to utils/plotting_utils.py
561f8ed
@saforem2
Updates to utils/autocorr.py
2200dce
@saforem2
Enforce path requirement when loading charge data in utils/autocorr.py
d6fd77d
@saforem2
Adds check for dynamic step size when calculating params for autocorrs
f732e1f
@saforem2
Removes incorrect import from utils/training_utils.py
e4949f6
@saforem2
Adds notebook for running HMC via tf-probability
9c6a781
@saforem2
Prepends string passed to io.rule with timestamp
ab4da9b
@saforem2
Updates to `utils/{training_utils.py,inference_utils.py,plotting_util…
8da0c0e 
…s.py}`
@saforem2
Adds unnormalized_log_prob method to GaugeLattice
d18abe6
@saforem2
Updates to doc/*
6fc9ac6
@saforem2
Updates to utils/autocorr.py (9)
cc51120
@saforem2
Changes to how metrics string is generated in DataContainers
41180b4
@saforem2
Changes latice_shape to x_shape throughout lattice/
3cbe796
@saforem2
Changes latice_shape to x_shape
1912cd9
@saforem2
Adds doc/autocorrs/autocorrs.tex
4e6db5a
@saforem2
Updates to .gitignore
ae0a0fc
@saforem2
Renaming lattice_shape to x_shape
68c6b07
@saforem2
Renaming lattice_shape to x_shape
60f35fc
@saforem2
Renaming lattice_shape to x_shape
fd2cc5b
@saforem2
Updates to GaugeDynamics
b60a958
@saforem2
Updates to GaugeDynamics
53f3725
@saforem2
Updates to .gitignore
f9b8ba0
@saforem2
Type annotataions in utils/file_io.py
e50b46b
@saforem2
Updates to notebooks/autocorr_stats1.ipynb
e931399
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@saforem2 saforem2 merged commit 749687a into master Jan 14, 2021
@saforem2 saforem2 deleted the rich branch February 13, 2021 02:45
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