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module_list.py
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module_list.py
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#!/usr/bin/env python
import os, sys
from distutils.core import setup
from distutils.extension import Extension
#########################################################
### Configure SAGE_ROOT
#########################################################
if not os.environ.has_key('SAGE_ROOT'):
print " ERROR: The environment variable SAGE_ROOT must be defined."
sys.exit(1)
else:
SAGE_ROOT = os.environ['SAGE_ROOT']
SAGE_LOCAL = SAGE_ROOT + '/local'
SAGE_DEVEL = SAGE_ROOT + '/devel'
SAGE_INC = SAGE_LOCAL + '/include/'
#########################################################
### BLAS setup
#########################################################
## Choose cblas library -- note -- make sure to update sage/misc/cython.py
## if you change this!!
if os.environ.has_key('SAGE_BLAS'):
BLAS=os.environ['SAGE_BLAS']
BLAS2=os.environ['SAGE_BLAS']
elif os.path.exists('%s/lib/libatlas.so'%os.environ['SAGE_LOCAL']):
BLAS='cblas'
BLAS2='atlas'
elif os.path.exists('/usr/lib/libcblas.dylib') or \
os.path.exists('/usr/lib/libcblas.so'):
BLAS='cblas'
BLAS2='atlas'
elif os.path.exists('/usr/lib/libblas.dll.a'):
BLAS='gslcblas'
BLAS2='gslcblas'
else:
# This is very slow (?), but *guaranteed* to be available.
BLAS='gslcblas'
BLAS2='gslcblas'
#########################################################
### Commonly used definitions
#########################################################
numpy_include_dirs = [SAGE_LOCAL + '/lib/python/site-packages/numpy/core/include']
# We pick a file from numpy which is autogenerated so it has the
# timestamp of the numpy build.
numpy_depends = [SAGE_LOCAL + '/lib/python/site-packages/numpy/core/include/numpy/_numpyconfig.h']
flint_depends = [SAGE_INC + 'FLINT/flint.h']
singular_depends = [SAGE_INC + 'libsingular.h', SAGE_INC + 'givaro/givconfig.h']
ginac_depends = [SAGE_INC + 'pynac/ginac.h']
#########################################################
### M4RI flags
#########################################################
import ast
m4ri_extra_compile_args = []
for line in open(SAGE_INC + "m4ri/m4ri_config.h"):
if not line.startswith("#define __M4RI_SIMD_CFLAGS"):
continue
m4ri_sse2_cflags = ast.literal_eval(line[len("#define __M4RI_SIMD_CFLAGS"):].strip())
m4ri_extra_compile_args = [flag.strip() for flag in m4ri_sse2_cflags.split(" ") if flag.strip()]
break
singular_libs = ['m', 'readline', 'singular', 'givaro', 'ntl', 'gmpxx', 'gmp']
#########################################################
### PolyBoRi defines
#########################################################
polybori_extra_compile_args = []
for line in open(SAGE_LOCAL + "/share/polybori/flags.conf"):
if not line.startswith("CPPDEFINES"):
continue
polybori_extra_compile_args = ["-D"+e for e in ast.literal_eval(line[len("CPPDEFINES = "):])]
break
#############################################################
### List of modules
###
### Note that the list of modules is sorted alphabetically
### by extension name. Please keep this list sorted when
### adding new modules!
###
#############################################################
def uname_specific(name, value, alternative):
if name in os.uname()[0]:
return value
else:
return alternative
ext_modules = [
################################
##
## sage.algebras
##
################################
Extension('sage.algebras.quatalg.quaternion_algebra_element',
sources = ['sage/algebras/quatalg/quaternion_algebra_element.pyx'],
language='c++',
libraries = ["csage", "flint", "gmp", "gmpxx", "m", "stdc++", "ntl"],
include_dirs = [SAGE_INC + 'FLINT/'],
depends = flint_depends),
Extension('sage.algebras.quatalg.quaternion_algebra_cython',
sources = ['sage/algebras/quatalg/quaternion_algebra_cython.pyx'],
language='c++',
libraries = ["csage", "flint", "gmp", "gmpxx", "m", "stdc++", "ntl"]),
################################
##
## sage.calculus
##
################################
Extension('sage.calculus.var',
sources = ['sage/calculus/var.pyx']),
Extension('sage.calculus.riemann',
sources = ['sage/calculus/riemann.pyx'],
include_dirs = numpy_include_dirs,
depends = numpy_depends),
Extension('sage.calculus.interpolators',
sources = ['sage/calculus/interpolators.pyx'],
include_dirs = numpy_include_dirs,
depends = numpy_depends),
################################
##
## sage.categories
##
################################
Extension('sage.categories.action',
sources = ['sage/categories/action.pyx']),
Extension('sage.categories.category_singleton',
sources = ['sage/categories/category_singleton.pyx']),
Extension('sage.categories.functor',
sources = ['sage/categories/functor.pyx']),
Extension('sage.categories.map',
sources = ['sage/categories/map.pyx']),
Extension('sage.categories.morphism',
sources = ['sage/categories/morphism.pyx']),
Extension('sage.categories.examples.semigroups_cython',
sources = ['sage/categories/examples/semigroups_cython.pyx']),
################################
##
## sage.coding
##
################################
Extension('sage.coding.binary_code',
sources = ['sage/coding/binary_code.pyx']),
################################
##
## sage.combinat
##
################################
Extension('sage.combinat.expnums',
sources = ['sage/combinat/expnums.pyx'],
libraries = ['gmp']),
Extension('sage.combinat.matrices.dancing_links',
sources = ['sage/combinat/matrices/dancing_links.pyx'],
libraries = ["stdc++"],
language='c++'),
Extension('sage.structure.list_clone',
sources=['sage/structure/list_clone.pyx']),
Extension('sage.structure.list_clone_timings_cy',
sources=['sage/structure/list_clone_timings_cy.pyx']),
Extension('sage.sets.finite_set_map_cy',
sources=['sage/sets/finite_set_map_cy.pyx']),
Extension('sage.combinat.partitions',
sources = ['sage/combinat/partitions.pyx',
'sage/combinat/partitions_c.cc'],
libraries = ['gmp', 'mpfr'],
depends = ['sage/combinat/partitions_c.h'],
language='c++'),
Extension('sage.combinat.words.word_datatypes',
sources=['sage/combinat/words/word_datatypes.pyx'],
include_dirs = ['sage/combinat/words'],
libraries = ['stdc++'],
language='c++'),
Extension('sage.combinat.permutation_cython',
sources=['sage/combinat/permutation_cython.pyx']),
Extension('sage.combinat.dict_addition',
sources=['sage/combinat/dict_addition.pyx']),
Extension('sage.combinat.debruijn_sequence',
sources=['sage/combinat/debruijn_sequence.pyx']),
Extension('sage.combinat.degree_sequences',
sources = ['sage/combinat/degree_sequences.pyx']),
Extension('sage.combinat.combinat_cython',
sources=['sage/combinat/combinat_cython.pyx'],
libraries=['gmp']),
Extension('sage.combinat.enumeration_mod_permgroup',
sources=['sage/combinat/enumeration_mod_permgroup.pyx']),
################################
##
## sage.crypto
##
################################
Extension('sage.crypto.boolean_function',
sources = ['sage/crypto/boolean_function.pyx']),
################################
##
## sage.ext
##
################################
Extension('sage.ext.c_lib',
sources = ['sage/ext/c_lib.pyx']),
Extension('sage.ext.fast_callable',
sources = ['sage/ext/fast_callable.pyx']),
Extension('sage.ext.fast_eval',
sources = ['sage/ext/fast_eval.pyx']),
Extension('sage.ext.interactive_constructors_c',
sources = ['sage/ext/interactive_constructors_c.pyx']),
Extension('sage.ext.multi_modular',
sources = ['sage/ext/multi_modular.pyx'],
extra_compile_args = ['-std=c99'],
libraries=['gmp']),
################################
##
## sage.finance
##
################################
Extension('sage.finance.fractal',
sources = ['sage/finance/fractal.pyx'],
depends = numpy_depends),
Extension('sage.finance.markov_multifractal_cython',
sources = ['sage/finance/markov_multifractal_cython.pyx']),
Extension('sage.finance.time_series',
sources = ['sage/finance/time_series.pyx'],
include_dirs = numpy_include_dirs,
depends = numpy_depends),
################################
##
## sage.functions
##
################################
Extension('sage.functions.prime_pi',
sources = ['sage/functions/prime_pi.pyx']),
################################
##
## sage.games
##
################################
Extension('sage.games.sudoku_backtrack',
sources = ['sage/games/sudoku_backtrack.pyx']),
################################
##
## sage.geometry
##
################################
Extension('sage.geometry.point_collection',
sources = ['sage/geometry/point_collection.pyx']),
Extension('sage.geometry.toric_lattice_element',
sources = ['sage/geometry/toric_lattice_element.pyx'],
libraries=['gmp']),
Extension('sage.geometry.integral_points',
sources = ['sage/geometry/integral_points.pyx']),
Extension('sage.geometry.triangulation.base',
sources = ['sage/geometry/triangulation/functions.cc',
'sage/geometry/triangulation/data.cc',
'sage/geometry/triangulation/base.pyx',
'sage/geometry/triangulation/triangulations.cc'],
language="c++"),
################################
##
## sage.graphs
##
################################
Extension('sage.graphs.chrompoly',
sources = ['sage/graphs/chrompoly.pyx'],
libraries = ['gmp']),
Extension('sage.graphs.cliquer',
sources = ['sage/graphs/cliquer.pyx'],
libraries = ['cliquer']),
Extension('sage.graphs.graph_decompositions.vertex_separation',
sources = ['sage/graphs/graph_decompositions/vertex_separation.pyx']),
Extension('sage.graphs.convexity_properties',
sources = ['sage/graphs/convexity_properties.pyx']),
Extension('sage.graphs.comparability',
sources = ['sage/graphs/comparability.pyx']),
Extension('sage.graphs.generic_graph_pyx',
sources = ['sage/graphs/generic_graph_pyx.pyx'],
libraries = ['gmp']),
Extension('sage.graphs.graph_generators_pyx',
sources = ['sage/graphs/graph_generators_pyx.pyx']),
Extension('sage.graphs.distances_all_pairs',
sources = ['sage/graphs/distances_all_pairs.pyx']),
Extension('sage.graphs.base.static_sparse_graph',
sources = ['sage/graphs/base/static_sparse_graph.pyx']),
Extension('sage.graphs.modular_decomposition.modular_decomposition',
sources = ['sage/graphs/modular_decomposition/modular_decomposition.pyx'],
depends = ['sage/graphs/modular_decomposition/src/dm.c',
'sage/graphs/modular_decomposition/src/dm_english.h']),
Extension('sage.graphs.matchpoly',
sources = ['sage/graphs/matchpoly.pyx'],
libraries = ['gmp', 'flint'],
include_dirs = [SAGE_INC + 'FLINT/'],
extra_compile_args = ['-std=c99'],
depends = flint_depends),
Extension('sage.graphs.planarity',
sources = ['sage/graphs/planarity/graphColorVertices.c',
'sage/graphs/planarity/graphColorVertices_Extensions.c',
'sage/graphs/planarity/graphDrawPlanar.c',
'sage/graphs/planarity/graphDrawPlanar_Extensions.c',
'sage/graphs/planarity/graphEmbed.c',
'sage/graphs/planarity/graphExtensions.c',
'sage/graphs/planarity/graphIO.c',
'sage/graphs/planarity/graphIsolator.c',
'sage/graphs/planarity/graphK23Search.c',
'sage/graphs/planarity/graphK23Search_Extensions.c',
'sage/graphs/planarity/graphK33Search.c',
'sage/graphs/planarity/graphK33Search_Extensions.c',
'sage/graphs/planarity/graphK4Search.c',
'sage/graphs/planarity/graphK4Search_Extensions.c',
'sage/graphs/planarity/graphNonplanar.c',
'sage/graphs/planarity/graphOuterplanarObstruction.c',
'sage/graphs/planarity/graphPreprocess.c',
'sage/graphs/planarity/graphTests.c',
'sage/graphs/planarity/graphUtils.c',
'sage/graphs/planarity/listcoll.c',
'sage/graphs/planarity/planarity.c',
'sage/graphs/planarity/planarityCommandLine.c',
'sage/graphs/planarity/planarityRandomGraphs.c',
'sage/graphs/planarity/planaritySpecificGraph.c',
'sage/graphs/planarity/planarityUtils.c',
'sage/graphs/planarity/stack.c',
'sage/graphs/planarity.pyx'],
depends = ['sage/graphs/planarity/appconst.h',
'sage/graphs/planarity/graphColorVertices.h',
'sage/graphs/planarity/graphColorVertices.private.h',
'sage/graphs/planarity/graphDrawPlanar.h',
'sage/graphs/planarity/graphDrawPlanar.private.h',
'sage/graphs/planarity/graphExtensions.h',
'sage/graphs/planarity/graphExtensions.private.h',
'sage/graphs/planarity/graphFunctionTable.h',
'sage/graphs/planarity/graph.h',
'sage/graphs/planarity/graphK23Search.h',
'sage/graphs/planarity/graphK23Search.private.h',
'sage/graphs/planarity/graphK33Search.h',
'sage/graphs/planarity/graphK33Search.private.h',
'sage/graphs/planarity/graphK4Search.h',
'sage/graphs/planarity/graphK4Search.private.h',
'sage/graphs/planarity/graphStructures.h',
'sage/graphs/planarity/listcoll.h',
'sage/graphs/planarity/planarity.h',
'sage/graphs/planarity/platformTime.h',
'sage/graphs/planarity/stack.h']),
Extension('sage.graphs.graph_decompositions.rankwidth',
sources = ['sage/graphs/graph_decompositions/rankwidth.pyx']),
Extension('sage.graphs.spanning_tree',
sources = ['sage/graphs/spanning_tree.pyx']),
Extension('sage.graphs.trees',
sources = ['sage/graphs/trees.pyx']),
Extension('sage.graphs.genus',
sources = ['sage/graphs/genus.pyx']),
################################
##
## sage.graphs.base
##
################################
Extension('sage.graphs.base.c_graph',
sources = ['sage/graphs/base/c_graph.pyx']),
Extension('sage.graphs.base.sparse_graph',
sources = ['sage/graphs/base/sparse_graph.pyx']),
Extension('sage.graphs.base.dense_graph',
sources = ['sage/graphs/base/dense_graph.pyx']),
################################
##
## sage.groups
##
################################
Extension('sage.groups.group',
sources = ['sage/groups/group.pyx']),
Extension('sage.groups.perm_gps.permgroup_element',
sources = ['sage/groups/perm_gps/permgroup_element.pyx']),
###################################
##
## sage.groups.perm_gps.partn_ref
##
###################################
Extension('sage.groups.perm_gps.partn_ref.automorphism_group_canonical_label',
sources = ['sage/groups/perm_gps/partn_ref/automorphism_group_canonical_label.pyx'],
libraries = ['gmp', 'flint'],
include_dirs = [SAGE_INC + 'FLINT/'],
extra_compile_args = ['-std=c99'],
depends = flint_depends),
Extension('sage.groups.perm_gps.partn_ref.double_coset',
sources = ['sage/groups/perm_gps/partn_ref/double_coset.pyx'],
libraries = ['gmp', 'flint'],
include_dirs = [SAGE_INC + 'FLINT/'],
extra_compile_args = ['-std=c99'],
depends = flint_depends),
Extension('sage.groups.perm_gps.partn_ref.refinement_binary',
sources = ['sage/groups/perm_gps/partn_ref/refinement_binary.pyx'],
libraries = ['gmp', 'flint'],
include_dirs = [SAGE_INC + 'FLINT/'],
extra_compile_args = ['-std=c99'],
depends = flint_depends),
Extension('sage.groups.perm_gps.partn_ref.refinement_graphs',
sources = ['sage/groups/perm_gps/partn_ref/refinement_graphs.pyx'],
libraries = ['gmp', 'flint'],
include_dirs = [SAGE_INC + 'FLINT/'],
extra_compile_args = ['-std=c99'],
depends = flint_depends),
Extension('sage.groups.perm_gps.partn_ref.refinement_lists',
sources = ['sage/groups/perm_gps/partn_ref/refinement_lists.pyx'],
libraries = ['gmp', 'flint'],
include_dirs = [SAGE_INC + 'FLINT/'],
extra_compile_args = ['-std=c99'],
depends = flint_depends),
Extension('sage.groups.perm_gps.partn_ref.refinement_matrices',
sources = ['sage/groups/perm_gps/partn_ref/refinement_matrices.pyx'],
libraries = ['gmp', 'flint'],
include_dirs = [SAGE_INC + 'FLINT/'],
extra_compile_args = ['-std=c99'],
depends = flint_depends),
Extension('sage.groups.perm_gps.partn_ref.refinement_python',
sources = ['sage/groups/perm_gps/partn_ref/refinement_python.pyx'],
libraries = ['gmp', 'flint'],
include_dirs = [SAGE_INC + 'FLINT/'],
extra_compile_args = ['-std=c99'],
depends = flint_depends),
################################
##
## sage.gsl
##
################################
Extension('sage.gsl.callback',
sources = ['sage/gsl/callback.pyx'],
libraries = ['gsl', BLAS, BLAS2],
define_macros=[('GSL_DISABLE_DEPRECATED','1')]),
Extension('sage.gsl.dwt',
sources = ['sage/gsl/dwt.pyx'],
libraries=['gsl',BLAS],
define_macros=[('GSL_DISABLE_DEPRECATED','1')]),
Extension('sage.gsl.fft',
sources = ['sage/gsl/fft.pyx'],
libraries = ['gsl', BLAS, BLAS2],
define_macros=[('GSL_DISABLE_DEPRECATED','1')]),
Extension('sage.gsl.gsl_array',
sources = ['sage/gsl/gsl_array.pyx'],
libraries=['gsl', BLAS, BLAS2],
define_macros=[('GSL_DISABLE_DEPRECATED','1')]),
Extension('sage.gsl.integration',
sources = ['sage/gsl/integration.pyx'],
define_macros=[('GSL_DISABLE_DEPRECATED','1')],
libraries=['gsl',BLAS, BLAS2]),
Extension('sage.gsl.interpolation',
sources = ['sage/gsl/interpolation.pyx'],
libraries = ['gsl', BLAS, BLAS2],
define_macros=[('GSL_DISABLE_DEPRECATED','1')]),
Extension('sage.gsl.ode',
sources = ['sage/gsl/ode.pyx'],
libraries=['gsl',BLAS, BLAS2],
define_macros=[('GSL_DISABLE_DEPRECATED','1')]),
Extension('sage.gsl.probability_distribution',
sources = ['sage/gsl/probability_distribution.pyx'],
libraries=['gsl', BLAS, BLAS2],
define_macros=[('GSL_DISABLE_DEPRECATED','1')]),
################################
##
## sage.interacts
##
################################
Extension('sage.interacts.library_cython',
sources = ['sage/interacts/library_cython.pyx'],
libraries = []),
################################
##
## sage.libs
##
################################
Extension('sage.libs.ecl',
sources = ["sage/libs/ecl.pyx"],
libraries = ["ecl"],
include_dirs = [SAGE_INC + 'ecl/'],
depends = [SAGE_INC + 'ecl/ecl.h']),
Extension('sage.libs.flint.flint',
sources = ["sage/libs/flint/flint.pyx"],
libraries = ["csage", "flint", "gmp", "gmpxx", "m", "stdc++"],
include_dirs = [SAGE_INC + 'FLINT/'],
extra_compile_args=["-std=c99", "-D_XPG6"],
depends = flint_depends),
Extension('sage.libs.flint.fmpz_poly',
sources = ["sage/libs/flint/fmpz_poly.pyx"],
libraries = ["csage", "flint", "gmp", "gmpxx", "m", "stdc++"],
include_dirs = [SAGE_INC + 'FLINT/'],
extra_compile_args=["-std=c99", "-D_XPG6"],
depends = flint_depends),
Extension('sage.libs.fplll.fplll',
sources = ['sage/libs/fplll/fplll.pyx'],
libraries = ['gmp', 'mpfr', 'stdc++', 'fplll'],
language="c++",
include_dirs = [SAGE_INC + 'fplll'],
depends = [SAGE_INC + "fplll/fplll.h"]),
Extension('sage.libs.linbox.linbox',
sources = ['sage/libs/linbox/linbox.pyx'],
# For this to work on cygwin, linboxsage *must* be
# before ntl.
libraries = ['linboxsage', 'ntl', 'linbox',
'stdc++', 'givaro', 'gmp', 'gmpxx', BLAS, BLAS2],
language = 'c++',
depends = [SAGE_INC + 'givaro/givconfig.h']),
Extension('sage.libs.lcalc.lcalc_Lfunction',
sources = ['sage/libs/lcalc/lcalc_Lfunction.pyx'],
libraries = ['m', 'ntl', 'mpfr', 'gmp', 'gmpxx',
'Lfunction', 'stdc++'],
include_dirs = [SAGE_INC + "lcalc/"],
extra_compile_args=["-O3", "-ffast-math"],
language = 'c++'),
Extension('sage.libs.libecm',
sources = ['sage/libs/libecm.pyx'],
libraries = ['ecm', 'gmp'],
extra_link_args = uname_specific("Linux", ["-Wl,-z,noexecstack"],
[]),
depends = [SAGE_INC + "ecm.h"]),
Extension('sage.libs.mwrank.mwrank',
sources = ["sage/libs/mwrank/mwrank.pyx",
"sage/libs/mwrank/wrap.cc"],
define_macros = [("NTL_ALL",None)],
depends = ["sage/libs/mwrank/wrap.h"] +
[ SAGE_INC + "eclib/" + h for h in
["curve.h","egr.h","descent.h","points.h","isogs.h",
"marith.h","htconst.h","interface.h"]
],
libraries = ["jc",
"ntl", "gmp", "gmpxx", "stdc++", "m", "pari"]),
# IMHO "pari" could be removed here, but some people
# claim it is needed on Cygwin (see #9896, #9914).
# If so, we should use uname_specific(). -leif
Extension('sage.libs.pari.gen',
sources = ["sage/libs/pari/gen.pyx"],
libraries = ['pari', 'gmp']),
Extension('sage.libs.ppl',
sources = ['sage/libs/ppl.pyx', 'sage/libs/ppl_shim.cc'],
libraries = ['ppl', 'gmpxx', 'gmp', 'm'],
language="c++",
depends = [SAGE_INC + "ppl.hh"]),
Extension('sage.libs.ratpoints',
sources = ["sage/libs/ratpoints.pyx"],
depends = [SAGE_INC + 'ratpoints.h'],
libraries = ["ratpoints", "gmp"]),
Extension('sage.libs.singular.singular',
sources = ['sage/libs/singular/singular.pyx'],
libraries = singular_libs,
language="c++",
include_dirs = [SAGE_INC + 'singular', SAGE_INC + 'factory'],
depends = singular_depends),
Extension('sage.libs.singular.polynomial',
sources = ['sage/libs/singular/polynomial.pyx'],
libraries = singular_libs,
language="c++",
include_dirs = [SAGE_INC + 'singular', SAGE_INC + 'factory'],
depends = singular_depends),
Extension('sage.libs.singular.ring',
sources = ['sage/libs/singular/ring.pyx'],
libraries = singular_libs,
language="c++",
include_dirs = [SAGE_INC + 'singular', SAGE_INC + 'factory'],
depends = singular_depends),
Extension('sage.libs.singular.groebner_strategy',
sources = ['sage/libs/singular/groebner_strategy.pyx'],
libraries = singular_libs,
language="c++",
include_dirs = [SAGE_INC + 'singular', SAGE_INC + 'factory'],
depends = singular_depends),
Extension('sage.libs.singular.function',
sources = ['sage/libs/singular/function.pyx'],
libraries = singular_libs,
language="c++",
include_dirs = [SAGE_INC +'singular', SAGE_INC + 'factory'],
depends = singular_depends),
Extension('sage.libs.singular.option',
sources = ['sage/libs/singular/option.pyx'],
libraries = singular_libs,
language="c++",
include_dirs = [SAGE_INC + 'singular', SAGE_INC + 'factory'],
depends = singular_depends),
Extension('sage.libs.symmetrica.symmetrica',
sources = ["sage/libs/symmetrica/%s"%s for s in ["symmetrica.pyx"]],
include_dirs = ['/usr/include/malloc/'],
libraries = ["symmetrica"],
depends = [SAGE_INC + "symmetrica/def.h"]),
Extension('sage.libs.mpmath.utils',
sources = ["sage/libs/mpmath/utils.pyx"],
libraries = ['mpfr', 'gmp']),
Extension('sage.libs.mpmath.ext_impl',
sources = ["sage/libs/mpmath/ext_impl.pyx"],
libraries = ['mpfr', 'gmp']),
Extension('sage.libs.mpmath.ext_main',
sources = ["sage/libs/mpmath/ext_main.pyx"],
libraries = ['gmp']),
Extension('sage.libs.mpmath.ext_libmp',
sources = ["sage/libs/mpmath/ext_libmp.pyx"],
libraries = ['gmp']),
###################################
##
## sage.libs.cremona
##
###################################
Extension('sage.libs.cremona.homspace',
sources = ["sage/libs/cremona/homspace.pyx"],
libraries = ['jc', 'gmpxx', 'ntl', 'gmp',
'm', 'stdc++', 'pari'],
# IMHO "pari" could be removed here, but some people
# claim it is needed on Cygwin (see #9896, #9914).
# If so, we should use uname_specific(). -leif
language='c++',
define_macros = [("NTL_ALL",None)],
depends = [ SAGE_INC + "eclib/" + h for h in
["interface.h","bigrat.h","rat.h","curve.h",
"moddata.h","symb.h","cusp.h","homspace.h","mat.h"]
]),
Extension('sage.libs.cremona.mat',
sources = ["sage/libs/cremona/mat.pyx"],
libraries = ['jc', 'gmpxx', 'ntl',
'gmp', 'm', 'stdc++', ],
language='c++',
define_macros = [("NTL_ALL",None)],
depends = [ SAGE_INC + "eclib/" + h for h in
["interface.h","bigrat.h","rat.h","curve.h",
"moddata.h","symb.h","cusp.h","homspace.h","mat.h"]
]),
Extension('sage.libs.cremona.newforms',
sources = ["sage/libs/cremona/newforms.pyx"],
libraries = ['jc', 'gmpxx', 'ntl', 'gmp',
'm', 'stdc++', 'pari'],
# IMHO "pari" could be removed here, but some people
# claim it is needed on Cygwin (see #9896, #9914).
# If so, we should use uname_specific(). -leif
language='c++',
define_macros = [("NTL_ALL",None)],
depends = [ SAGE_INC + "eclib/" + h for h in
["interface.h","bigrat.h","rat.h","curve.h",
"moddata.h","symb.h","cusp.h","xsplit.h","method.h",
"oldforms.h","homspace.h","cperiods.h","newforms.h"]
]),
###################################
##
## sage.libs.ntl
##
###################################
# NOTE: It is *very* important (for cygwin) that csage be the
# first library listed for all ntl extensions below.
Extension('sage.libs.ntl.ntl_GF2',
sources = ["sage/libs/ntl/ntl_GF2.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_GF2E',
sources = ["sage/libs/ntl/ntl_GF2E.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_GF2EContext',
sources = ["sage/libs/ntl/ntl_GF2EContext.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_GF2EX',
sources = ["sage/libs/ntl/ntl_GF2EX.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_GF2X',
sources = ["sage/libs/ntl/ntl_GF2X.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_lzz_p',
sources = ["sage/libs/ntl/ntl_lzz_p.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_lzz_pContext',
sources = ["sage/libs/ntl/ntl_lzz_pContext.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_lzz_pX',
sources = ["sage/libs/ntl/ntl_lzz_pX.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_mat_GF2',
sources = ["sage/libs/ntl/ntl_mat_GF2.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_mat_GF2E',
sources = ["sage/libs/ntl/ntl_mat_GF2E.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_mat_ZZ',
sources = ["sage/libs/ntl/ntl_mat_ZZ.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_ZZ',
sources = ["sage/libs/ntl/ntl_ZZ.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_ZZX',
sources = ["sage/libs/ntl/ntl_ZZX.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_ZZ_p',
sources = ["sage/libs/ntl/ntl_ZZ_p.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_ZZ_pContext',
sources = ["sage/libs/ntl/ntl_ZZ_pContext.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_ZZ_pE',
sources = ["sage/libs/ntl/ntl_ZZ_pE.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_ZZ_pEContext',
sources = ["sage/libs/ntl/ntl_ZZ_pEContext.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_ZZ_pEX',
sources = ["sage/libs/ntl/ntl_ZZ_pEX.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
Extension('sage.libs.ntl.ntl_ZZ_pX',
sources = ["sage/libs/ntl/ntl_ZZ_pX.pyx"],
libraries = ["csage", "ntl", "gmp", "gmpxx", "m", "stdc++"],
language='c++'),
################################
##
## sage.matrix
##
################################
Extension('sage.matrix.action',
sources = ['sage/matrix/action.pyx']),
Extension('sage.matrix.change_ring',
sources = ['sage/matrix/change_ring.pyx'],
libraries=[BLAS, BLAS2, 'gmp'],
include_dirs = numpy_include_dirs),
Extension('sage.matrix.matrix',
sources = ['sage/matrix/matrix.pyx']),
Extension('sage.matrix.matrix0',
sources = ['sage/matrix/matrix0.pyx']),
Extension('sage.matrix.matrix1',
sources = ['sage/matrix/matrix1.pyx'],
depends = numpy_depends),
Extension('sage.matrix.matrix2',
sources = ['sage/matrix/matrix2.pyx']),
Extension('sage.matrix.matrix_complex_double_dense',
sources = ['sage/matrix/matrix_complex_double_dense.pyx'],
libraries=[BLAS, BLAS2],
include_dirs = numpy_include_dirs,
depends = numpy_depends),
Extension('sage.matrix.matrix_cyclo_dense',
sources = ['sage/matrix/matrix_cyclo_dense.pyx'],
language = "c++",
libraries=['ntl', 'gmp']),
#Extension('sage.matrix.matrix_cyclo_sparse',
# sources = ['sage/matrix/matrix_cyclo_sparse.pyx']),
Extension('sage.matrix.matrix_dense',
sources = ['sage/matrix/matrix_dense.pyx']),
#Extension('sage.matrix.matrix_domain_dense',
# sources = ['sage/matrix/matrix_domain_dense.pyx']),
#Extension('sage.matrix.matrix_domain_sparse',
# sources = ['sage/matrix/matrix_domain_sparse.pyx']),
Extension('sage.matrix.matrix_double_dense',
sources = ['sage/matrix/matrix_double_dense.pyx'],
libraries=[BLAS, BLAS2],
include_dirs = numpy_include_dirs,
depends = numpy_depends),
Extension('sage.matrix.matrix_generic_dense',
sources = ['sage/matrix/matrix_generic_dense.pyx']),
Extension('sage.matrix.matrix_generic_sparse',
sources = ['sage/matrix/matrix_generic_sparse.pyx']),
Extension('sage.matrix.matrix_integer_2x2',
sources = ['sage/matrix/matrix_integer_2x2.pyx'],
libraries = ['gmp']),
# TODO -- change to use BLAS at some point.
Extension('sage.matrix.matrix_integer_dense',
sources = ['sage/matrix/matrix_integer_dense.pyx'],
extra_compile_args = ['-std=c99'] + m4ri_extra_compile_args,
depends = [SAGE_INC + 'm4ri/m4ri.h'],
# order matters for cygwin!!
libraries = ['iml', 'pari', 'm', 'gmp', BLAS, BLAS2]),
Extension('sage.matrix.matrix_integer_sparse',
sources = ['sage/matrix/matrix_integer_sparse.pyx'],
libraries = ['gmp']),
Extension('sage.matrix.matrix_mod2_dense',
sources = ['sage/matrix/matrix_mod2_dense.pyx'],
libraries = ['gmp','m4ri', 'gd', 'png12', 'z'],
extra_compile_args = ['-std=c99'] + m4ri_extra_compile_args,
depends = [SAGE_INC + "png.h", SAGE_INC + "m4ri/m4ri.h"]),
Extension('sage.matrix.matrix_mod2e_dense',
sources = ['sage/matrix/matrix_mod2e_dense.pyx'],
libraries = ['m4rie', 'm4ri', 'givaro', 'ntl', 'gmpxx', 'gmp', 'm', 'stdc++'],
depends = [SAGE_INC + "m4rie/m4rie.h"],
include_dirs = [SAGE_INC + 'm4rie'],
extra_compile_args = m4ri_extra_compile_args,
language="c++"),
Extension('sage.matrix.matrix_modn_dense',
sources = ['sage/matrix/matrix_modn_dense.pyx'],
libraries = ['gmp']),
Extension('sage.matrix.matrix_modn_dense_float',
sources = ['sage/matrix/matrix_modn_dense_float.pyx'],
language="c++",
libraries = ['gmp', 'linbox', 'givaro', BLAS, BLAS2],
extra_compile_args = ['-DDISABLE_COMMENTATOR']),
Extension('sage.matrix.matrix_modn_dense_double',
sources = ['sage/matrix/matrix_modn_dense_double.pyx'],
language="c++",
libraries = ['gmp', 'linbox', 'givaro', BLAS, BLAS2],
extra_compile_args = ['-DDISABLE_COMMENTATOR']),
Extension('sage.matrix.matrix_modn_sparse',
sources = ['sage/matrix/matrix_modn_sparse.pyx'],
libraries = ['gmp']),
Extension('sage.matrix.matrix_mpolynomial_dense',
sources = ['sage/matrix/matrix_mpolynomial_dense.pyx'],
libraries = singular_libs,
language="c++",
include_dirs = [SAGE_INC + 'singular', SAGE_INC + 'factory'],
depends = singular_depends),
#Extension('sage.matrix.matrix_pid_dense',
# sources = ['sage/matrix/matrix_pid_dense.pyx']),
#Extension('sage.matrix.matrix_pid_sparse',
# sources = ['sage/matrix/matrix_pid_sparse.pyx']),
Extension('sage.matrix.matrix_rational_dense',
sources = ['sage/matrix/matrix_rational_dense.pyx'],