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@PortPy-Project
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  1. nadeemlab/DeepLIIF nadeemlab/DeepLIIF Public

    Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23]

    Python 136 54

  2. PortPy-Project/PortPy PortPy-Project/PortPy Public

    Opensource radiation treatment planning system in Python [AAPM'23]

    Python 68 15

  3. nadeemlab/CEP nadeemlab/CEP Public

    Computational Endoscopy Platform (advanced deep learning toolset for analyzing endoscopy videos) [MICCAI'22, MICCAI'21, ISBI'21, CVPR'20]

    Python 64 10

  4. nadeemlab/Physics-ArX nadeemlab/Physics-ArX Public

    Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'23, PMB'21, Medical Physics'21, AAPM'21]

    Python 49 12

  5. nadeemlab/DoseRTX nadeemlab/DoseRTX Public

    Domain knowledge driven 3D radiation dose prediction [PMB'22]

    Python 32 8

  6. nadeemlab/SPT nadeemlab/SPT Public

    Spatial profiling toolbox for spatial characterization of tumor immune microenvironment in multiplex images

    Python 22 2