Travis builds fail when tests fail

.travis.yml

@@ -10,50 +10,64 @@ branches:
     - master
     - beta
     - develop
+    - /^feature-.*$/
+    - /^bugfix-.*$/
 
 env:
-    - Drivers=True    # First in build mx because long duration
-    - Algorithms=True 
-    - AlgorithmsB=True
-    - Default=True    # construction, io, objects, tools, optimize
-    - Report=True      
-    - ReportB=True
-    - MPI=True        
+  global:
+    - NOSEOPTS_DEFAULT="-v --with-timer --with-id --rednose"
+    - NOSEOPTS_PARALLEL="--processes=-1 --process-timeout=2400" # timeout after 40 minutes (travis job timeout is 50 minutes)
+    - NOSEOPTS_ALL="$NOSEOPTS_DEFAULT $NOSEOPTS_PARALLEL"
+  matrix:
+    - NOSETESTS="drivers objects" NOSEOPTS=$NOSEOPTS_ALL # first in build mx because long duration
+    - NOSETESTS="algorithms" NOSEOPTS=$NOSEOPTS_ALL
+    - NOSETESTS="algorithmsb" NOSEOPTS=$NOSEOPTS_ALL
+    - NOSETESTS="tools iotest optimize construction extras" NOSEOPTS=$NOSEOPTS_ALL
+    - NOSETESTS="report" NOSEOPTS=$NOSEOPTS_ALL
+    - NOSETESTS="reportb" NOSEOPTS=$NOSEOPTS_ALL
+    - NOSETESTS="mpi" NOSEOPTS=$NOSEOPTS_DEFAULT # cannot be run in parallel
 
+# Install native package dependencies & initialize build environment
 before_install:
-  - sudo apt-get -qq update
-  - sudo apt-get -qq install gfortran libblas-dev liblapack-dev
-  - sudo apt-get -qq install openmpi-bin openmpi-common openssh-client openssh-server libopenmpi1.6 libopenmpi1.6-dbg libopenmpi-dev > /dev/null
-  - sudo bash CI/install.sh # travis_wait 30 "sudo bash CI/install.sh" # > /dev/null 2>&1"
-  - "export DISPLAY=:99.0"
-  - "sh -e /etc/init.d/xvfb start" #some tests require a display
-  - sleep 3 # give xvfb some time to start
+  - >
+    sudo apt-get update -qq -y &&
+    sudo apt-get install -qq -y
+    gfortran libblas-dev liblapack-dev openmpi-bin openmpi-common openssh-client
+    openssh-server libopenmpi1.6 libopenmpi1.6-dbg libopenmpi-dev
+    libsuitesparse-dev
+  - export DISPLAY=:99.0
+  - /bin/sh -e /etc/init.d/xvfb start && sleep 3 # some tests require a display
+  - cmake --version
+  - gcc --version
 
+# Install python package dependencies
 install:
-  - pip install zmq coverage >/dev/null
   - pip install -e .[travisci]
-
+
+# Default `test' stage script
+script:
+  - cd test/test_packages
+  - nosetests $NOSEOPTS $NOSETESTS
+
+# Cache pip packages
 cache:
   pip: true
   timeout: 1000
 
-#Script For default "test" stage
-script:
-  - cd test
-  - python travisTests.py # just produce test_packages/runTravisTests.sh
-  - cd test_packages
-  - source runTravisTests.sh # no need for travis_wait (always outputs every 9m)
-  - cd ../..
+stages:
+  - test
+  - name: deploy # only run deployment for master & develop branches
+    if: branch IN (master, develop)
 
 jobs:
   include:
     - stage: deploy
       python: 3.5
-      env: Drivers=False Algorithms=False AlgorithmsB=False Default=False Report=False ReportB=False MPI=False
+      env: NOSETESTS=none NOSEOPTS=$NOSEOPTS_DEFAULT
+      install: skip
       script: python CI/deploy
 
 notifications:
-    email:
-        on_success: change
-        on_failure: always
-
+  email:
+    on_success: change
+    on_failure: always

setup.py

@@ -28,14 +28,14 @@
                   #libraries=['m'] #math lib?
                   ),
         Extension("pygsti.objects.fastopcalc",
-                  sources=["packages/pygsti/objects/fastopcalc.pyx"], 
+                  sources=["packages/pygsti/objects/fastopcalc.pyx"],
                   include_dirs=['.', np.get_include()],
                   language="c++",
                   extra_compile_args=["-std=c++11"], #,"-stdlib=libc++"
                   extra_link_args=["-std=c++11"]
                   ),
         Extension("pygsti.objects.fastreplib",
-                  sources=["packages/pygsti/objects/fastreplib.pyx", "packages/pygsti/objects/fastreps.cpp"], 
+                  sources=["packages/pygsti/objects/fastreplib.pyx", "packages/pygsti/objects/fastreps.cpp"],
                   include_dirs=['.', np.get_include()],
                   language="c++",
                   extra_compile_args=["-std=c++11"], #,"-stdlib=libc++"
@@ -47,7 +47,7 @@
 except ImportError: # if Cython isn't available (e.g. in readthedocs) just skip
     #print warning??
     ext_modules = []
-    
+
 
 classifiers = """\
 Development Status :: 4 - Beta
@@ -102,11 +102,14 @@
            'generating PDFs of report figures': ['matplotlib'],
            'generating report notebooks': ['ipython','notebook'],
            'read/write message pack format': ['msgpack'],
-	   'extension modules': ['cython'],
-           'complete': ['nose','cython','cvxpy','cvxopt','psutil','mpi4py','pandas','matplotlib','ipython','notebook','msgpack'],
-           'travisci': ['nose','nose-timer','cython','cvxpy','cvxopt','psutil','mpi4py','pandas','msgpack']
+           'extension modules': ['cython'],
+           'complete': ['nose','nose-timer','cython','cvxpy','cvxopt','psutil',
+                        'mpi4py','pandas','matplotlib','ipython','notebook',
+                        'msgpack','coverage','zmq','rednose'],
+           'travisci': ['nose','nose-timer','cython','cvxpy','cvxopt','psutil',
+                        'mpi4py','pandas','msgpack','coverage','zmq','rednose']
       },
-      platforms = ["any"],      
+      platforms = ["any"],
       url = 'http://www.pygsti.info',
       download_url = 'https://github.com/pyGSTio/pyGSTi/tarball/master',
       keywords = ['pygsti', 'tomography', 'gate set', 'pigsty', 'pig', 'quantum', 'qubit'],