Skip to content

Commit

Permalink
Update config.yaml
Browse files Browse the repository at this point in the history
  • Loading branch information
sandragodinhosilva committed Sep 16, 2022
1 parent 4d6bda2 commit a0517b9
Showing 1 changed file with 8 additions and 2 deletions.
10 changes: 8 additions & 2 deletions config.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -11,6 +11,7 @@ outdir: "results"
outdir_anno: "results/Annotation"
logdir: "logs"

# Step 1: Genome Annotation
# --- Evalues:
cog_evalue: "1e-5"
pfam_evalue: "1e-5"
Expand All @@ -22,6 +23,11 @@ KEGG: True
CAZYMES: False
MEROPS: True

# --- Run Feature Selection (True or False)
# Step 2: Feature Selection (FS)
# --- Run FS? (True or False)
FS: True
# Note: To run Feature Selection add metadata.csv to inputdir folder!

# --- Category to be used in FS
Metadata_category: Origin

# Note: To run Feature Selection, add metadata.csv to inputdir folder!

0 comments on commit a0517b9

Please sign in to comment.