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R package for naive geneset over-enrichment testing.

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Geneset Fisher

R package for naive geneset over-enrichment testing.

Simple Fisher tests are used.

Results tables include odds-ratios and gene symbols.

Includes functions for reading and writing GMT files and for translating GMT files from human to mouse.

The package can be used for the pathway analysis and visualisation of single-cell data.

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R package for naive geneset over-enrichment testing.

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