Pinned

1. Biograph Biograph Public

2. Removing-mouse-contamination-from-WES--paired-end-sequencing Removing-mouse-contamination-from-WES--paired-end-sequencing Public

   This program removes mouse contamination from BAM files

   Python

3. Removing-mouse-contamination-from-RNAseq_single-end-sequencing Removing-mouse-contamination-from-RNAseq_single-end-sequencing Public

   This program removes mouse reads /ambiguous reads from the aligned SAM files .

   Python

4. Extracting-mouse-reads-from-SAM-files Extracting-mouse-reads-from-SAM-files Public

   This program extracts mouse reads from SAM file.

   Python

5. Extracting-unaligned-reads-from-SAM-files Extracting-unaligned-reads-from-SAM-files Public

   This program extracts unaligned reads (*) from SAM files.

   Python

6. HCI-Scripts HCI-Scripts Public

   Forked from tjparnell/HCI-Scripts

   Miscellaneous bioinformatics scripts written by me for myself and other people

   Perl