feat: patch patient last menstrual period observation

- This patches patient's LMP entries
savannahghi · Feb 1, 2024 · a6335e7 · a6335e7
1 parent c0e53bc
commit a6335e7
Show file tree

Hide file tree

Showing 6 changed files with 282 additions and 6 deletions.
diff --git a/pkg/clinical/presentation/graph/clinical.graphql b/pkg/clinical/presentation/graph/clinical.graphql
@@ -129,8 +129,11 @@ extend type Query {
   # Media
   listPatientMedia(patientID: ID!, pagination: Pagination!): MediaConnection
 
-    # Questionnaire
-  listQuestionnaires(searchParam: String, pagination: Pagination!): QuestionnaireConnection!
+  # Questionnaire
+  listQuestionnaires(
+    searchParam: String
+    pagination: Pagination!
+  ): QuestionnaireConnection!
 }
 
 extend type Mutation {
@@ -198,10 +201,15 @@ extend type Mutation {
   patchPatientPulseRate(id: String!, value: String!): Observation!
   patchPatientViralLoad(id: String!, value: String!): Observation!
   patchPatientMuac(id: String!, value: String!): Observation!
+  patchPatientLastMenstrualPeriod(id: String!, value: String!): Observation!
 
   # Consent
   recordConsent(input: ConsentInput!): ConsentOutput!
 
   # questionnaireResponse
-  createQuestionnaireResponse(questionnaireID: String!, encounterID: String! input: QuestionnaireResponseInput!): QuestionnaireResponse!
+  createQuestionnaireResponse(
+    questionnaireID: String!
+    encounterID: String!
+    input: QuestionnaireResponseInput!
+  ): QuestionnaireResponse!
 }
diff --git a/pkg/clinical/presentation/graph/clinical.resolvers.go b/pkg/clinical/presentation/graph/clinical.resolvers.go
diff --git a/pkg/clinical/presentation/graph/generated/generated.go b/pkg/clinical/presentation/graph/generated/generated.go
diff --git a/pkg/clinical/usecases/clinical/observation.go b/pkg/clinical/usecases/clinical/observation.go
@@ -123,6 +123,11 @@ func (c *UseCasesClinicalImpl) PatchPatientMuac(ctx context.Context, id string,
 	return c.PatchPatientObservations(ctx, id, value)
 }
 
+// patchPatientLastMenstrualPeriod patches the last menstrual record of a patient
+func (c *UseCasesClinicalImpl) PatchPatientLastMenstrualPeriod(ctx context.Context, id string, value string) (*dto.Observation, error) {
+	return c.PatchPatientObservations(ctx, id, value)
+}
+
 // RecordWeight records a patient's weight
 func (c *UseCasesClinicalImpl) RecordWeight(ctx context.Context, input dto.ObservationInput) (*dto.Observation, error) {
 	weightObservation, err := c.RecordObservation(ctx, input, common.WeightCIELTerminologyCode, []ObservationInputMutatorFunc{addVitalSignCategory})

diff --git a/pkg/clinical/usecases/clinical/observation_test.go b/pkg/clinical/usecases/clinical/observation_test.go
@@ -5652,6 +5652,136 @@ func TestUseCasesClinicalImpl_RecordLastMenstrualPeriod(t *testing.T) {
 	}
 }
 
+func TestUseCasesClinicalImpl_PatchPatientLastMenstrualPeriod(t *testing.T) {
+	type args struct {
+		ctx   context.Context
+		id    string
+		value string
+	}
+	tests := []struct {
+		name    string
+		args    args
+		wantErr bool
+	}{
+		{
+			name: "Happy Case - successfully patch patient observation",
+			args: args{
+				ctx:   context.Background(),
+				id:    gofakeit.UUID(),
+				value: "160",
+			},
+			wantErr: false,
+		},
+		{
+			name: "Sad Case - missing observation ID",
+			args: args{
+				ctx:   context.Background(),
+				value: "160",
+			},
+			wantErr: true,
+		},
+		{
+			name: "Sad Case - Fail validation nil value",
+			args: args{
+				ctx:   context.Background(),
+				id:    gofakeit.UUID(),
+				value: "",
+			},
+			wantErr: true,
+		},
+		{
+			name: "Sad Case - fail to get observation",
+			args: args{
+				ctx:   context.Background(),
+				id:    gofakeit.UUID(),
+				value: "160",
+			},
+			wantErr: true,
+		},
+		{
+			name: "Sad Case: fail to get encounter",
+			args: args{
+				ctx:   context.Background(),
+				id:    gofakeit.UUID(),
+				value: "160",
+			},
+			wantErr: true,
+		},
+		{
+			name: "Sad Case: fail on finished encounter",
+			args: args{
+				ctx:   context.Background(),
+				id:    gofakeit.UUID(),
+				value: "160",
+			},
+			wantErr: true,
+		},
+		{
+			name: "Sad Case - fail to patch patient last menstrual period observation",
+			args: args{
+				ctx:   context.Background(),
+				id:    gofakeit.UUID(),
+				value: "160",
+			},
+			wantErr: true,
+		},
+	}
+	for _, tt := range tests {
+		fakeExt := fakeExtMock.NewFakeBaseExtensionMock()
+		fakeFHIR := fakeFHIRMock.NewFHIRMock()
+		fakeOCL := fakeOCLMock.NewFakeOCLMock()
+		fakePubSub := fakePubSubMock.NewPubSubServiceMock()
+
+		fakeUpload := fakeUploadMock.NewFakeUploadMock()
+
+		infra := infrastructure.NewInfrastructureInteractor(fakeExt, fakeFHIR, fakeOCL, fakeUpload, fakePubSub)
+		u := clinicalUsecase.NewUseCasesClinicalImpl(infra)
+
+		if tt.name == "Sad Case - fail to get observation" {
+			fakeFHIR.MockGetFHIRObservationFn = func(ctx context.Context, id string) (*domain.FHIRObservationRelayPayload, error) {
+				return nil, fmt.Errorf("an error occurred")
+			}
+		}
+
+		if tt.name == "Sad Case: fail to get encounter" {
+			fakeFHIR.MockGetFHIREncounterFn = func(ctx context.Context, id string) (*domain.FHIREncounterRelayPayload, error) {
+				return nil, fmt.Errorf("an error occurred")
+			}
+		}
+
+		if tt.name == "Sad Case: fail on finished encounter" {
+			fakeFHIR.MockGetFHIREncounterFn = func(ctx context.Context, id string) (*domain.FHIREncounterRelayPayload, error) {
+				UUID := uuid.New().String()
+				PatientRef := "Patient/" + uuid.NewString()
+				return &domain.FHIREncounterRelayPayload{
+					Resource: &domain.FHIREncounter{
+						ID:         &UUID,
+						Text:       &domain.FHIRNarrative{},
+						Identifier: []*domain.FHIRIdentifier{},
+						Status:     domain.EncounterStatusEnum(domain.EncounterStatusEnumFinished),
+						Subject: &domain.FHIRReference{
+							ID:        &UUID,
+							Reference: &PatientRef,
+						},
+					},
+				}, nil
+			}
+		}
+
+		if tt.name == "Sad Case - fail to patch patient last menstrual period observation" {
+			fakeFHIR.MockPatchFHIRObservationFn = func(ctx context.Context, id string, input domain.FHIRObservationInput) (*domain.FHIRObservation, error) {
+				return nil, fmt.Errorf("an error occurred")
+			}
+		}
+
+		_, err := u.PatchPatientLastMenstrualPeriod(tt.args.ctx, tt.args.id, tt.args.value)
+		if (err != nil) != tt.wantErr {
+			t.Errorf("UseCasesClinicalImpl.PatchPatientLastMenstrualPeriod() error = %v, wantErr %v", err, tt.wantErr)
+			return
+		}
+	}
+}
+
 func TestUseCasesClinicalImpl_GetPatientLastMenstrualPeriodEntries(t *testing.T) {
 	first := 10
 	ctx := context.Background()

diff --git a/pkg/clinical/usecases/usecases.go b/pkg/clinical/usecases/usecases.go
@@ -99,6 +99,7 @@ type Clinical interface {
 	PatchPatientPulseRate(ctx context.Context, id string, value string) (*dto.Observation, error)
 	PatchPatientViralLoad(ctx context.Context, id string, value string) (*dto.Observation, error)
 	PatchPatientMuac(ctx context.Context, id string, value string) (*dto.Observation, error)
+	PatchPatientLastMenstrualPeriod(ctx context.Context, id string, value string) (*dto.Observation, error)
 	RecordHPV(ctx context.Context, input dto.ObservationInput) (*dto.Observation, error)
 	RecordPapSmear(ctx context.Context, input dto.ObservationInput) (*dto.Observation, error)