index.rst

Welcome to COBRAme's documentation!

This resource is intended to:

1. Provide an overview of what ME-models are and how they work
2. Describe the architecture of the COBRAme code base.
3. Highlight the major object classes and how they interrelate
4. Demonstrate basic model building and editing procedures
5. Provide examples of how to query, edit and update information in a constructed ME-Model

.. toctree::
   :numbered:
   :maxdepth: 2

   MEModelFundamentals
   CobrameArchitectureOverview
   building_a_model
   Reaction_Manipulation
   cobrame

Indices and tables

• :ref:`genindex`
• :ref:`modindex`
• :ref:`search`