code for motion correction, source extraction, ratiometric dF/F, visualization, and behavior analysis
* behavior folder contains code to process behavior video data
* imaging folder contains code to process volumetric imaging data, including motion correction and source extraction
* compilation folder contains code to connect imaging and behavior data
* visualization folder contains code to make plots and movies
* submitScripts folder contains examples of wrapper scripts from which to execute everything else. These are meant to be personalized to an file organization on an individual computer.