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Please explicitly specify mode="rb" in GzipCompressor.get_reader

Status: Open.

#2576 In scikit-bio/scikit-bio;

· tillea opened on Sep 9, 2026

BUG: rda ignores sample_ids, feature_ids and constraint_ids

Status: Open.

#2571 In scikit-bio/scikit-bio;

· Arthur031221 opened on Sep 6, 2026

ENH: Tree log-likelihood

Status: Open.

#2539 In scikit-bio/scikit-bio;

· keder opened on Aug 19, 2026

BUG: GFF3 reader does not percent-decode attribute values

Status: Open.

#2454 In scikit-bio/scikit-bio;

· r0hansaxena opened on Apr 19, 2026

ENH: Reduce Pandas overhead in permdisp

Status: Open.

#2442 In scikit-bio/scikit-bio;

· r0hansaxena opened on Apr 3, 2026

ENH: Add Array API compatibility to augmentation functions in skbio.stats.composition

Status: Open.

#2418 In scikit-bio/scikit-bio;

· AnkurBambhrolia opened on Mar 12, 2026

permdisp 'median' test fails on macOS 15 on Intel silicon

Status: Open.

#2382 In scikit-bio/scikit-bio;

· mataton opened on Feb 11, 2026

dirmult_lme tests: investigate cross-platform numerical inconsistencies

Status: Open.

#2379 In scikit-bio/scikit-bio;

· mataton opened on Feb 10, 2026

Paralellization of dirmult_lme

performance

Status: Open.

#2376 In scikit-bio/scikit-bio;

· mataton opened on Feb 10, 2026

Metadata module incompatibility with pandas 3.0

maintenance

Status: Open.

#2375 In scikit-bio/scikit-bio;

· mataton opened on Feb 6, 2026

Clarification Needed: Numerical Instability in DirMultLMETests.test_dirmult_lme_re_formula on AMD Zen3 Systems

Status: Open.

#2372 In scikit-bio/scikit-bio;

· Neves-P opened on Jan 25, 2026

Balanced parenthesis as an accelerator for numerical computing

Status: Open.

#2364 In scikit-bio/scikit-bio;

· mortonjt opened on Jan 6, 2026