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[MRG+1] OPTICS fit uses the selected extract_method parameter #12087

Merged
merged 39 commits into from Mar 3, 2019
Merged

[MRG+1] OPTICS fit uses the selected extract_method parameter #12087

merged 39 commits into from Mar 3, 2019

Commits on Sep 16, 2018

  1. add extract method parameter

    @adrinjalali
    adrinjalali committed Sep 16, 2018
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  2. change fancy to sqlnk

    @adrinjalali
    adrinjalali committed Sep 16, 2018
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  3. test for invalid extract_method value

    @adrinjalali
    adrinjalali committed Sep 16, 2018
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  4. test easy dbscan

    @adrinjalali
    adrinjalali committed Sep 16, 2018
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  5. pep8

    @adrinjalali
    adrinjalali committed Sep 16, 2018
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  6. add extract_sqlnk

    @adrinjalali
    adrinjalali committed Sep 16, 2018
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  7. mention which parameter is used for which extact method

    @adrinjalali
    adrinjalali committed Sep 16, 2018
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  8. add tests for extract methods with no params given

    @adrinjalali
    adrinjalali committed Sep 16, 2018
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Commits on Sep 17, 2018

  1. merge master

    @adrinjalali
    adrinjalali committed Sep 17, 2018
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Commits on Sep 20, 2018

  1. Merge remote-tracking branch 'upstream/master' into optics/choose_ext… 

    …ractor
    @adrinjalali
    adrinjalali committed Sep 20, 2018
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Commits on Sep 24, 2018

  1. Merge branch 'master' into optics/choose_extractor

    @adrinjalali
    adrinjalali committed Sep 24, 2018
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  2. Add the reference for the SQLNK method.

    @adrinjalali
    adrinjalali committed Sep 24, 2018
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  3. make extract_optics_dbscan and extract_optics_sqlnk public

    @adrinjalali
    adrinjalali committed Sep 24, 2018
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Commits on Oct 7, 2018

  1. merge upstream

    @adrinjalali
    adrinjalali committed Oct 7, 2018
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Commits on Oct 16, 2018

  1. fix references, sync docstrings

    @adrinjalali
    adrinjalali committed Oct 16, 2018
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Commits on Oct 30, 2018

  1. Merge remote-tracking branch 'upstream/master' into optics/choose_ext… 

    …ractor
    @adrinjalali
    adrinjalali committed Oct 30, 2018
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  2. fix more morege conflicts

    @adrinjalali
    adrinjalali committed Oct 30, 2018
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Commits on Nov 23, 2018

  1. Merge remote-tracking branch 'upstream/master' into optics/choose_ext… 

    …ractor
    @adrinjalali
    adrinjalali committed Nov 23, 2018
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  2. reorganize the code and get it closer to what we want

    @adrinjalali
    adrinjalali committed Nov 23, 2018
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  3. pep8

    @adrinjalali
    adrinjalali committed Nov 23, 2018
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Commits on Feb 26, 2019

  1. Merge remote-tracking branch 'upstream/master' into optics/choose_ext… 

    …ractor
    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  2. remove sqlnk, make compute_optics_graph public

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  3. pep8

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  4. remove unused reference

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  5. make tests pass

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  6. fix docstrings

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  7. fix removal of removed parameter

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  8. add back min_cluster size, xi needs it

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  9. Merge remote-tracking branch 'upstream/master' into optics/choose_ext… 

    …ractor
    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  10. pep8

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  11. fix docstring issue

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  12. address Hanmin's comments

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  13. Merge remote-tracking branch 'upstream/master' into optics/choose_ext… 

    …ractor
    @adrinjalali
    adrinjalali committed Feb 26, 2019
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  14. remove core_sample_indices_

    @adrinjalali
    adrinjalali committed Feb 26, 2019
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Commits on Feb 27, 2019

  1. fix comment

    @adrinjalali
    adrinjalali committed Feb 27, 2019
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  2. pep8

    @adrinjalali
    adrinjalali committed Feb 27, 2019
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  3. apply comments, remove example

    @adrinjalali
    adrinjalali committed Feb 27, 2019
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Commits on Feb 28, 2019

  1. add public functions to classes.rst and __init__

    @adrinjalali
    adrinjalali committed Feb 28, 2019
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Commits on Mar 1, 2019

  1. address Joel's comments

    @adrinjalali
    adrinjalali committed Mar 1, 2019
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