black formatting

pytaxize/col/col.py

@@ -14,6 +14,7 @@
     warnings.warn("Pandas library not installed, dataframes disabled")
     pd = None
 
+
 def children(name=None, id=None, format=None, start=None, checklist=None):
     """
     Search Catalogue of Life for for direct children of a particular taxon.

pytaxize/gbif/parse.py

@@ -7,6 +7,7 @@
     warnings.warn("Pandas library not installed, dataframes disabled")
     pd = None
 
+
 def parse(name, as_dataframe=False):
     """
     Parse taxon names using the GBIF name parser.

pytaxize/gn/gnr.py

@@ -5,9 +5,11 @@
 from pytaxize.refactor import Refactor
 import os
 
+
 class NoResultException(Exception):
     pass
 
+
 def gnr_datasources():
     """
     Get data sources for the Global Names Resolver.

pytaxize/ids/ids.py

@@ -4,6 +4,7 @@
 from pytaxize.ncbi import ncbi
 from ..gbif.gbif_utils import *
 
+
 class NoResultException(Exception):
     pass
 
@@ -63,14 +64,18 @@ def ncbi(self, verbose=True):
                     rank_taken = z["Rank"]
                     result = _make_id(id[0], fname, z["Rank"], "ncbi")
                 if len(id) > 1:
-                    result = [ _make_id(w["TaxId"], w["ScientificName"], w["Rank"], "ncbi") for w in res[fname] ]
+                    result = [
+                        _make_id(w["TaxId"], w["ScientificName"], w["Rank"], "ncbi")
+                        for w in res[fname]
+                    ]
             out.append(result)
         # out = _flatten(out)
         if isinstance(out, dict):
             out = [out]
         if isinstance(out[0], list):
             out = out[0]
         return out
+
     # def col(self, verbose=True):
     #     """
     #     Get Catalogue of Life taxonomic identifiers
@@ -134,6 +139,7 @@ def ncbi(self, verbose=True):
 
     #     return out
 
+
 def _make_id(id, name, rank, type):
     if id is None:
         uri = None
@@ -146,6 +152,7 @@ def _make_id(id, name, rank, type):
         "uri": uri,
     }
 
+
 def _converter(x):
     if x.__class__.__name__ == "str":
         return [x]
@@ -156,6 +163,7 @@ def _converter(x):
 def _flatten(x):
     return [item for sublist in x for item in sublist]
 
+
 id_uris = {
     "col": {
         "species": "http://www.catalogueoflife.org/col/details/species/id/%s",
@@ -167,6 +175,7 @@ def _flatten(x):
     },
 }
 
+
 def _make_id_uri(rank, which, x):
     if rank is not None:
         if rank.lower() == "species":