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Non unique column names throw obscure error in concat #483

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falexwolf opened this issue Dec 21, 2020 · 2 comments · Fixed by #1029
Closed

Non unique column names throw obscure error in concat #483

falexwolf opened this issue Dec 21, 2020 · 2 comments · Fixed by #1029

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@falexwolf
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The following error is thrown as one AnnData object has two columns with the same name in .obs. It'd be great to have a better error message ("non-unique column names do not work with concat outer"):
image

@ivirshup
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Oh, yeah that's super unhelpful.

Weird that pandas give's a much better error for non-unique indices (#480). This is an old open issue in pandas: pandas-dev/pandas#6963

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