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ValueError: '_index' is a reserved name for dataframe columns. Above error raised while writing key 'var' of to / #990
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It looks like there may be a column in |
Hi, Thank you. |
Oh I wish it was that easy. But attempting to make sure that all those nested objects trigger some kind of hook in their parent AnnData object when modified (which would allow us to catch incompatibilities before they end up in the AnnData object) is sadly very hard. We can certainly work on making messages friendlier, like e.g. the borked second one here:
What does |
This issue has been automatically marked as stale because it has not had recent activity. |
OK, the poor error messages should be fixed since #1273 |
Hi there,
I was trying to write my adata with
write_h5ad
but it threw an error as below.Would you mind helping me fix this issue?
Thank you.
My AnnData object:
The text was updated successfully, but these errors were encountered: