Add bhm_rm_v0_2

python/sdssdb/peewee/sdss5db/catalogdb.py

@@ -936,6 +936,10 @@ class Meta:
         table_name = 'bhm_rm_v0'
 
 
+class BHM_RM_v0_2(BHM_RM_v0):
+    pass
+
+
 class Gaia_DR2_RUWE(CatalogdbModel):
 
     gaia = ForeignKeyField(Gaia_DR2,

schema/sdss5db/catalogdb/bhm_rm/v0_2/bhm_rm_v0_2.sql

@@ -0,0 +1,168 @@
+/*
+
+BHM Reverberation Mapping Photometry v0_2.
+
+See /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/target/catalogs/RM/v0/rm_photo_v0_readme
+CSV file generated using sdssdb.utils.ingest.to_csv with default options.
+
+*/
+
+CREATE TABLE catalogdb.bhm_rm_v0_2 (
+    field_name VARCHAR(8),
+    ra DOUBLE PRECISION,
+    dec DOUBLE PRECISION,
+    distance DOUBLE PRECISION,
+    pos_ref VARCHAR(4),
+    ebv DOUBLE PRECISION,
+    des INTEGER,
+    coadd_object_id BIGINT,
+    ra_des DOUBLE PRECISION,
+    dec_des DOUBLE PRECISION,
+    extended_coadd INTEGER,
+    psfmag_des DOUBLE PRECISION[5],
+    psfmagerr_des DOUBLE PRECISION[5],
+    mag_auto_des DOUBLE PRECISION[5],
+    magerr_auto_des DOUBLE PRECISION[5],
+    imaflags_iso INTEGER[5],
+    separation_des DOUBLE PRECISION,
+    ps1 INTEGER,
+    objid_ps1 BIGINT,
+    ra_ps1 DOUBLE PRECISION,
+    dec_ps1 DOUBLE PRECISION,
+    class_ps1 DOUBLE PRECISION,
+    psfmag_ps1 DOUBLE PRECISION[5],
+    psfmagerr_ps1 DOUBLE PRECISION[5],
+    kronmag_ps1 DOUBLE PRECISION[5],
+    kronmagerr_ps1 DOUBLE PRECISION[5],
+    infoflag2 INTEGER[5],
+    separation_ps1 DOUBLE PRECISION,
+    nsc INTEGER,
+    id_nsc BIGINT,
+    ra_nsc DOUBLE PRECISION,
+    dec_nsc DOUBLE PRECISION,
+    class_star DOUBLE PRECISION,
+    mag_nsc DOUBLE PRECISION[5],
+    magerr_nsc DOUBLE PRECISION[5],
+    flags_nsc INTEGER,
+    separation_nsc DOUBLE PRECISION,
+    sdss INTEGER,
+    objid_sdss BIGINT,
+    ra_sdss DOUBLE PRECISION,
+    dec_sdss DOUBLE PRECISION,
+    type_sdss INTEGER,
+    psfmag_sdss DOUBLE PRECISION[5],
+    psfmagerr_sdss DOUBLE PRECISION[5],
+    modelmag_sdss DOUBLE PRECISION[5],
+    modelmagerr_sdss DOUBLE PRECISION[5],
+    clean_sdss INTEGER,
+    separation_sdss DOUBLE PRECISION,
+    gaia INTEGER,
+    source_id_gaia BIGINT,
+    mg DOUBLE PRECISION,
+    mag_gaia DOUBLE PRECISION[3],
+    magerr_gaia DOUBLE PRECISION[3],
+    parallax DOUBLE PRECISION,
+    parallax_error DOUBLE PRECISION,
+    plxsig DOUBLE PRECISION,
+    pmra DOUBLE PRECISION,
+    pmra_error DOUBLE PRECISION,
+    pmdec DOUBLE PRECISION,
+    pmdec_error DOUBLE PRECISION,
+    pmsig DOUBLE PRECISION,
+    unwise INTEGER,
+    objid_unwise VARCHAR(16),
+    ra_unwise DOUBLE PRECISION,
+    dec_unwise DOUBLE PRECISION,
+    mag_unwise DOUBLE PRECISION[2],
+    magerr_unwise DOUBLE PRECISION[2],
+    flags_unwise INTEGER[2],
+    separation_unwise DOUBLE PRECISION,
+    near_ir INTEGER,
+    survey_ir VARCHAR(6),
+    sourceid_ir BIGINT,
+    ra_ir DOUBLE PRECISION,
+    dec_ir DOUBLE PRECISION,
+    mag_ir DOUBLE PRECISION[4],
+    magerr_ir DOUBLE PRECISION[4],
+    separation_ir DOUBLE PRECISION,
+    optical_survey VARCHAR(4),
+    mi DOUBLE PRECISION,
+    cal_skewt_qso INTEGER,
+    nband_optical_use INTEGER,
+    use_unwise INTEGER,
+    use_nir INTEGER,
+    photo_combination VARCHAR(17),
+    log_qso DOUBLE PRECISION,
+    log_star DOUBLE PRECISION,
+    log_galaxy DOUBLE PRECISION,
+    p_qso DOUBLE PRECISION,
+    p_star REAL,
+    p_galaxy DOUBLE PRECISION,
+    class_skewt_qso VARCHAR(6),
+    skewt_qso INTEGER,
+    p_qso_prior DOUBLE PRECISION,
+    p_star_prior REAL,
+    p_galaxy_prior DOUBLE PRECISION,
+    class_skewt_qso_prior VARCHAR(6),
+    skewt_qso_prior INTEGER,
+    photoz_qso DOUBLE PRECISION,
+    photoz_qso_lower DOUBLE PRECISION,
+    photoz_qso_upper DOUBLE PRECISION,
+    prob_photoz_qso DOUBLE PRECISION,
+    photoz_galaxy DOUBLE PRECISION,
+    photoz_galaxy_lower DOUBLE PRECISION,
+    photoz_galaxy_upper DOUBLE PRECISION,
+    pqso_xdqso DOUBLE PRECISION,
+    photoz_xdqso DOUBLE PRECISION,
+    prob_rf_gaia_unwise DOUBLE PRECISION,
+    photoz_gaia_unwise DOUBLE PRECISION,
+    des_var_nepoch INTEGER[5],
+    des_var_status INTEGER[5],
+    des_var_rms DOUBLE PRECISION[5],
+    des_var_sigrms DOUBLE PRECISION[5],
+    des_var_sn DOUBLE PRECISION[5],
+    des_var_sn_max DOUBLE PRECISION,
+    ps1_var_nepoch INTEGER[5],
+    ps1_var_status INTEGER[5],
+    ps1_var_rms DOUBLE PRECISION[5],
+    ps1_var_sigrms DOUBLE PRECISION[5],
+    ps1_var_sn DOUBLE PRECISION[5],
+    ps1_var_sn_max DOUBLE PRECISION,
+    spec_q INTEGER,
+    spec_strmask VARCHAR(6),
+    spec_bitmask BIGINT,
+    specz DOUBLE PRECISION,
+    specz_ref VARCHAR(16),
+    photo_q INTEGER,
+    photo_strmask VARCHAR(3),
+    photo_bitmask BIGINT,
+    photoz DOUBLE PRECISION,
+    pqso_photo DOUBLE PRECISION,
+    photoz_ref VARCHAR(16)
+) WITHOUT OIDS;
+
+
+\COPY catalogdb.bhm_rm_v0_2 FROM /uufs/chpc.utah.edu/common/home/sdss50/sdsswork/target/catalogs/RM/v0_2/rm_photo_v0.2.csv WITH CSV HEADER DELIMITER E'\t' NULL '\N';
+
+ALTER TABLE catalogdb.bhm_rm_v0_2 ADD COLUMN pk BIGSERIAL PRIMARY KEY;
+
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (q3c_ang2ipix(ra, dec));
+CLUSTER bhm_rm_v0_2_q3c_ang2ipix_idx ON catalogdb.bhm_rm_v0_2;
+VACUUM ANALYZE catalogdb.bhm_rm_v0_2;
+
+-- Update to NULL in columns that will be fks.
+UPDATE catalogdb.bhm_rm_v0_2 SET source_id_gaia = NULL WHERE gaia <= 0;
+UPDATE catalogdb.bhm_rm_v0_2 SET objid_ps1 = NULL WHERE ps1 <= 0;
+UPDATE catalogdb.bhm_rm_v0_2 SET objid_sdss = NULL WHERE sdss <= 0;
+UPDATE catalogdb.bhm_rm_v0_2 SET objid_unwise = NULL WHERE unwise <= 0;
+
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (mi);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (skewt_qso);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (pmsig);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (plxsig);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (spec_q);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (des_var_rms);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (des_var_sn);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (ps1_var_rms);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (ps1_var_sn);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (photo_bitmask);

schema/sdss5db/catalogdb/foreignKeys.sql

@@ -371,9 +371,9 @@ ALTER TABLE catalogdb.gaia_dr2_ruwe
 
 -- bhm_rm_v0
 
-CREATE INDEX CONCURRENTLY ON catalogdb.bhm_rm_v0 (source_id_gaia)
-CREATE INDEX CONCURRENTLY ON catalogdb.bhm_rm_v0 (objid_sdss)
-CREATE INDEX CONCURRENTLY ON catalogdb.bhm_rm_v0 (objid_unwise)
+CREATE INDEX CONCURRENTLY ON catalogdb.bhm_rm_v0 (source_id_gaia);
+CREATE INDEX CONCURRENTLY ON catalogdb.bhm_rm_v0 (objid_sdss);
+CREATE INDEX CONCURRENTLY ON catalogdb.bhm_rm_v0 (objid_unwise);
 
 ALTER TABLE catalogdb.bhm_rm_v0
     ADD CONSTRAINT source_id_gaia_fk
@@ -391,6 +391,28 @@ ALTER TABLE catalogdb.bhm_rm_v0
     REFERENCES catalogdb.unwise (unwise_objid);
 
 
+-- bhm_rm_v0_2
+
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (source_id_gaia);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (objid_sdss);
+CREATE INDEX ON catalogdb.bhm_rm_v0_2 (objid_unwise);
+
+ALTER TABLE catalogdb.bhm_rm_v0_2
+    ADD CONSTRAINT source_id_gaia_fk
+    FOREIGN KEY (source_id_gaia)
+    REFERENCES catalogdb.gaia_dr2_source (source_id);
+
+ALTER TABLE catalogdb.bhm_rm_v0_2
+    ADD CONSTRAINT objid_sdss_fk
+    FOREIGN KEY (objid_sdss)
+    REFERENCES catalogdb.sdss_dr13_photoobj (objid);
+
+ALTER TABLE catalogdb.bhm_rm_v0_2
+    ADD CONSTRAINT objid_unwise_fk
+    FOREIGN KEY (objid_unwise)
+    REFERENCES catalogdb.unwise (unwise_objid);
+
+
 -- gaia_assas_sn_cepheids
 
 ALTER TABLE catalogdb.gaia_assas_sn_cepheids