reference_h3n2_na.gb

LOCUS       CY113679                1436 bp    DNA              VRL 04-APR-2012
DEFINITION  Influenza A virus (A/Beijing/32/1992(H3N2)) neuraminidase (NA) gene,
            complete cds.
ACCESSION   CY113679
VERSION     CY113679.1
KEYWORDS    .
SOURCE      Influenza A virus (A/Beijing/32/1992(H3N2))
  ORGANISM  Influenza A virus (A/Beijing/32/1992(H3N2))
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus A.
REFERENCE   1  (bases 1 to 1436)
  AUTHORS   Wentworth,D.E., Dugan,V., Halpin,R., Lin,X., Bera,J., Ghedin,E.,
            Fedorova,N., Overton,L., Tsitrin,T., Stockwell,T., Amedeo,P.,
            Bishop,B., Chen,H., Edworthy,P., Gupta,N., Katzel,D., Li,K.,
            Schobel,S., Shrivastava,S., Thovarai,V., Wang,S., Westgeest,K.B.,
            van Beek,R., Bestebroer,T.M., de Jong,J.C., Rimmelzwaan,G.F.,
            Osterhaus,A.D.M.E., Fouchier,R.A.M., Bao,Y., Sanders,R.,
            Dernovoy,D., Kiryutin,B., Lipman,D.J. and Tatusova,T.
  TITLE     The NIAID Influenza Genome Sequencing Project
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1436)
  CONSRTM   The NIAID Influenza Genome Sequencing Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2012) on behalf of JCVI/Erasmus Medical
            College/NCBI, National Center for Biotechnology Information, NIH,
            Bethesda, MD 20894, USA
COMMENT     This work was supported by the National Institute of Allergy and
            Infectious Diseases (NIAID), Genome Sequencing Centers for
            Infectious Diseases (GSCID) program.
FEATURES             Location/Qualifiers
     source          1..1436
                     /bio_material="CEIRS#CIP047BE3292#"
                     /collection_date="1992"
                     /country="China: Beijing"
                     /db_xref="taxon:380950"
                     /host="Homo sapiens"
                     /lab_host="xtMK3 MDCK1 passage(s)"
                     /mol_type="viral cRNA"
                     /organism="Influenza A virus (A/Beijing/32/1992(H3N2))"
                     /segment="6"
                     /serotype="H3N2"
                     /strain="A/Beijing/32/1992"
     misc_feature    1..1436
                     /db_xref="IRD:NIGSP_CEIRS_CIP047_RFH3_00116.NA"
     gene            4..1413
                     /gene="NA"
     CDS             4..1410
                     /codon_start=1
                     /gene="NA"
                     /product="neuraminidase"
                     /protein_id="AFG99680.1"
                     /translation="MNPNQKIITIGSVSLTIATICFLMQIAILVTTVTLHFKQYECSSP
                     PNNQVILCQPTIIERNITEIVYLTNTTIEKEICPKLVEYRNWSKPQCKITGFAPFSKDN
                     SIRLSAGGDIWVTREPYVSCDPSKCYQFALGQGTTLNNRHSNDTVHDRTPYRTLLMNEL
                     GVPFHLGTKQVCIAWSSSSCHDGKAWLHVCVTGHDENATASFIYDGRLVDSIGSWSKNI
                     LRTQESECVCINGTCTVVMTDGSASERADTKILFIEEGKVVHISPLSGSAQHVEECSCY
                     PRYPGVRCVCRDNWKGSNRPIVDINVKDYSIVSSYVCSGLVGDTPRKNDSSSSSYCRNP
                     NNEKGSHGVKGWAFDDGNDVWMGRTISEELRSGYETFKVIGGWSTPNSKLQINRQVIVD
                     SGNRSGYSGIFSVEGKSCINRCFYVELIRGRKQETKVWWTSNSIVVFCGTSGTYGTGSW
                     PDGADINLMPI"
ORIGIN
        1 aagatgaatc caaatcaaaa gataataaca attggctctg tttctctcac tattgccaca
       61 atatgcttcc ttatgcaaat tgccatcctg gtaactactg taacattgca tttcaagcaa
      121 tatgagtgca gctccccccc aaacaaccaa gtaattctat gtcaaccaac aataatagaa
      181 agaaacataa cagagatagt gtatttgact aacaccacca tagagaaaga gatatgcccc
      241 aaactagtag aatacagaaa ttggtcaaag ccgcaatgta aaattacagg atttgcacct
      301 ttttctaagg acaattcaat tcggctttcc gctggtggag acatttgggt gacaagagaa
      361 ccttatgtgt catgcgatcc tagcaaatgt tatcaatttg cacttggaca gggaaccaca
      421 ctaaacaaca ggcattcaaa tgacacagta catgatagga ccccttatcg aaccctcttg
      481 atgaatgagt tgggtgttcc atttcatttg ggaaccaagc aagtgtgcat agcatggtcc
      541 agctcaagtt gtcacgatgg aaaagcatgg ctgcatgttt gtgtcactgg gcatgatgaa
      601 aatgcaactg ctagcttcat ttacgatggg aggcttgtag atagtattgg ttcatggtcc
      661 aaaaatatcc tcaggaccca ggagtcggaa tgcgtttgta tcaatgggac ttgtacagta
      721 gtaatgactg atggaagtgc ttcagaaaga gctgatacta aaatactatt cattgaagag
      781 gggaaagtcg ttcatattag cccattgtca ggaagtgctc agcatgtaga ggagtgctcc
      841 tgttatcctc gatatcctgg tgtcagatgt gtctgcagag acaactggaa aggctccaat
      901 aggcccatcg tagatataaa tgtgaaagat tatagcattg tttccagtta tgtgtgctca
      961 gggcttgttg gagacacacc cagaaaaaac gacagctcca gcagtagcta ttgccggaat
     1021 cctaacaatg agaaagggag tcatggagtg aaaggctggg cctttgacga tggaaatgac
     1081 gtgtggatgg gaagaacgat cagcgaggag ttacgctcag gttatgaaac cttcaaagtc
     1141 attggaggtt ggtccacacc taattccaaa ttgcagataa ataggcaagt catagttgac
     1201 agcggtaata ggtccggtta ttctggtatt ttctctgttg aaggcaaaag ctgcatcaat
     1261 cggtgctttt atgtggagtt gataagggga aggaaacagg aaactaaagt ctggtggacc
     1321 tcaaacagta ttgttgtgtt ttgtggcacc tcaggtacat atggaacagg ctcatggcct
     1381 gatggggcgg acatcaatct catgcctata taagctttcg caattttaga aaaaac
//