Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
Showing
14 changed files
with
1,377 additions
and
89 deletions.
There are no files selected for viewing
Binary file added
BIN
+31.5 MB
...ive_api/Director_Pytorch_Kvasir_UNET/director_folder/131814aa-0c0a-49b3-9cd3-a12aff178756
Binary file not shown.
Binary file added
BIN
+31.5 MB
...ive_api/Director_Pytorch_Kvasir_UNET/director_folder/7818bb85-a9ee-40f8-8529-1e2094d0d3b9
Binary file not shown.
Binary file added
BIN
+31.5 MB
...ive_api/Director_Pytorch_Kvasir_UNET/director_folder/eb89c679-4ae2-48da-a841-6708e2d8d46a
Binary file not shown.
Empty file.
Binary file added
BIN
+44.1 MB
...utorials/interactive_api/Director_Pytorch_Kvasir_UNET/envoy_folder/kvasir_data/kvasir.zip
Binary file not shown.
1 change: 1 addition & 0 deletions
1
...irector_Pytorch_Kvasir_UNET/envoy_folder/kvasir_data/segmented-images/bounding-boxes.json
Large diffs are not rendered by default.
Oops, something went wrong.
6 changes: 6 additions & 0 deletions
6
...ve_api/Director_Pytorch_Kvasir_UNET/envoy_folder/kvasir_data/segmented-images/license.txt
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,6 @@ | ||
The license for the Hyper-Kvasir dataset is Creative Commons Attribution 4.0 International (CC BY 4.0) | ||
|
||
More information can be found here: | ||
https://creativecommons.org/licenses/by/4.0/ | ||
|
||
======================================================================================== |
998 changes: 961 additions & 37 deletions
998
...interactive_api/Director_Pytorch_Kvasir_UNET/workspace/Updated_Kvasir_with_Director.ipynb
Large diffs are not rendered by default.
Oops, something went wrong.
Binary file added
BIN
+950 Bytes
...vasir_UNET/workspace/logs/kvasir_test_experiment/events.out.tfevents.1632828398.nnlicv611
Binary file not shown.
65 changes: 65 additions & 0 deletions
65
openfl-tutorials/interactive_api/Director_Pytorch_Kvasir_UNET/workspace/plan/plan.yaml
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,65 @@ | ||
aggregator: | ||
settings: | ||
best_state_path: save/best.pbuf | ||
db_store_rounds: 1 | ||
init_state_path: save/init.pbuf | ||
last_state_path: save/last.pbuf | ||
rounds_to_train: 4 | ||
template: openfl.component.Aggregator | ||
api_layer: | ||
required_plugin_components: | ||
serializer_plugin: openfl.plugins.interface_serializer.cloudpickle_serializer.CloudpickleSerializer | ||
settings: | ||
dataloader_interface_file: loader_obj.pkl | ||
model_interface_file: model_obj.pkl | ||
tasks_interface_file: tasks_obj.pkl | ||
assigner: | ||
settings: | ||
task_groups: | ||
- name: train_and_validate | ||
percentage: 1.0 | ||
tasks: | ||
- train | ||
- localy_tuned_model_validate | ||
- aggregated_model_validate | ||
template: openfl.component.RandomGroupedAssigner | ||
collaborator: | ||
settings: | ||
db_store_rounds: 1 | ||
delta_updates: false | ||
opt_treatment: CONTINUE_GLOBAL | ||
template: openfl.component.Collaborator | ||
data_loader: | ||
settings: | ||
train_bs: 4 | ||
valid_bs: 8 | ||
template: openfl.federated.DataLoader | ||
network: | ||
settings: | ||
agg_addr: localhost | ||
agg_port: auto | ||
cert_folder: cert | ||
client_reconnect_interval: 5 | ||
disable_client_auth: false | ||
hash_salt: auto | ||
tls: false | ||
template: openfl.federation.Network | ||
task_runner: | ||
required_plugin_components: | ||
framework_adapters: openfl.plugins.frameworks_adapters.pytorch_adapter.FrameworkAdapterPlugin | ||
settings: {} | ||
template: openfl.federated.task.task_runner.CoreTaskRunner | ||
tasks: | ||
aggregated_model_validate: | ||
function: validate | ||
kwargs: | ||
apply: global | ||
localy_tuned_model_validate: | ||
function: validate | ||
kwargs: | ||
apply: local | ||
settings: {} | ||
train: | ||
function: train | ||
kwargs: | ||
some_parameter: 42 |
232 changes: 232 additions & 0 deletions
232
openfl-tutorials/interactive_api/Director_Pytorch_Kvasir_UNET/workspace/requirements.txt
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,232 @@ | ||
absl-py==0.12.0 | ||
alabaster==0.7.12 | ||
albumentations==0.5.2 | ||
argon2-cffi==20.1.0 | ||
astunparse==1.6.3 | ||
async-generator==1.10 | ||
attrs==20.3.0 | ||
Babel==2.9.1 | ||
backcall==0.2.0 | ||
bleach==3.3.0 | ||
blis==0.7.4 | ||
cachetools==4.2.1 | ||
catalogue==2.0.6 | ||
certifi==2020.12.5 | ||
cffi==1.14.5 | ||
chardet==4.0.0 | ||
click==8.0.1 | ||
cloudpickle==1.3.0 | ||
colorama==0.4.4 | ||
commonmark==0.9.1 | ||
cryptography==3.4.6 | ||
cycler==0.10.0 | ||
cymem==2.0.5 | ||
Cython==0.29.22 | ||
dataclasses==0.6 | ||
decorator==4.4.2 | ||
defusedxml==0.7.1 | ||
dill==0.3.3 | ||
dm-tree==0.1.5 | ||
docker==4.4.4 | ||
docutils==0.16 | ||
dot2tex==2.11.3 | ||
entrypoints==0.3 | ||
eradicate==2.0.0 | ||
fastestimator==1.1.2 | ||
filelock==3.0.12 | ||
flake8==3.9.2 | ||
flake8-broken-line==0.3.0 | ||
flake8-bugbear==21.4.3 | ||
flake8-builtins==1.5.3 | ||
flake8-comprehensions==3.5.0 | ||
flake8-docstrings==1.6.0 | ||
flake8-eradicate==1.1.0 | ||
flake8-import-order==0.18.1 | ||
flake8-import-single==0.1.5 | ||
flake8-polyfill==1.0.2 | ||
flake8-quotes==3.2.0 | ||
flake8-use-fstring==1.1 | ||
flatbuffers==1.12 | ||
flatten-json==0.1.13 | ||
ftfy==6.0.3 | ||
future==0.18.2 | ||
gast==0.4.0 | ||
gdown==3.12.0 | ||
google-auth==1.28.0 | ||
google-auth-oauthlib==0.4.4 | ||
google-pasta==0.2.0 | ||
googleapis-common-protos==1.53.0 | ||
graphviz==0.14.1 | ||
grpcio==1.34.0 | ||
grpcio-tools==1.34.0 | ||
h5py==3.1.0 | ||
hiddenlayer==0.3 | ||
huggingface-hub==0.0.8 | ||
idna==2.10 | ||
imageio==2.9.0 | ||
imagesize==1.2.0 | ||
imgaug==0.4.0 | ||
importlib-resources==5.2.2 | ||
iniconfig==1.1.1 | ||
ipykernel==5.5.0 | ||
ipython==7.21.0 | ||
ipython-genutils==0.2.0 | ||
ipywidgets==7.6.3 | ||
jedi==0.18.0 | ||
Jinja2==2.11.3 | ||
joblib==1.0.1 | ||
jsonpickle==2.0.0 | ||
jsonschema==3.2.0 | ||
jupyter==1.0.0 | ||
jupyter-client==6.1.12 | ||
jupyter-console==6.3.0 | ||
jupyter-core==4.7.1 | ||
jupyterlab-pygments==0.1.2 | ||
jupyterlab-widgets==1.0.0 | ||
keras-nightly==2.5.0.dev2021032900 | ||
Keras-Preprocessing==1.1.2 | ||
kiwisolver==1.3.1 | ||
langcodes==3.1.0 | ||
lxml==4.6.3 | ||
Markdown==3.3.4 | ||
MarkupSafe==1.1.1 | ||
matplotlib==3.3.3 | ||
mccabe==0.6.1 | ||
mistune==0.8.4 | ||
mnist==0.2.2 | ||
msgpack==1.0.2 | ||
murmurhash==1.0.5 | ||
natsort==7.0.1 | ||
nb-clean==2.1.0 | ||
nbclient==0.5.3 | ||
nbconvert==6.0.7 | ||
nbformat==5.1.2 | ||
nest-asyncio==1.5.1 | ||
networkx==2.5 | ||
nibabel==3.2.1 | ||
notebook==6.3.0 | ||
numpy==1.19.5 | ||
oauthlib==3.1.0 | ||
opencv-python==4.5.1.48 | ||
opencv-python-headless==4.5.1.48 | ||
opt-einsum==3.3.0 | ||
ordered-set==4.0.2 | ||
packaging==20.9 | ||
pandas==1.3.3 | ||
pandocfilters==1.4.3 | ||
parameterized==0.8.1 | ||
parso==0.8.1 | ||
pathy==0.6.0 | ||
pep8-naming==0.12.0 | ||
pexpect==4.8.0 | ||
pickleshare==0.7.5 | ||
Pillow==8.1.2 | ||
pip==21.0.1 | ||
pipdeptree==2.1.0 | ||
pluggy==0.13.1 | ||
preshed==3.0.5 | ||
prometheus-client==0.9.0 | ||
promise==2.3 | ||
prompt-toolkit==3.0.18 | ||
protobuf==3.15.6 | ||
ptyprocess==0.7.0 | ||
py==1.10.0 | ||
pyarrow==5.0.0 | ||
pyasn1==0.4.8 | ||
pyasn1-modules==0.2.8 | ||
pycocotools-fix==2.0.0.9 | ||
pycodestyle==2.7.0 | ||
pycparser==2.20 | ||
pydantic==1.8.2 | ||
pydocstyle==6.1.1 | ||
pydot==1.4.1 | ||
pyfiglet==0.8.post1 | ||
pyflakes==2.3.0 | ||
Pygments==2.8.1 | ||
PyLaTeX==1.3.2 | ||
pyparsing==2.4.7 | ||
pyrsistent==0.17.3 | ||
PySocks==1.7.1 | ||
pytest==6.1.2 | ||
pytest-mock==3.4.0 | ||
python-dateutil==2.8.1 | ||
python-docx==0.8.10 | ||
pytorch-model-summary==0.1.2 | ||
pytz==2021.1 | ||
PyWavelets==1.1.1 | ||
PyYAML==5.4.1 | ||
pyzmq==22.0.3 | ||
qtconsole==5.0.3 | ||
QtPy==1.9.0 | ||
regex==2021.3.17 | ||
requests==2.25.1 | ||
requests-oauthlib==1.3.0 | ||
rich==9.1.0 | ||
rsa==4.7.2 | ||
sacremoses==0.0.43 | ||
scikit-image==0.17.2 | ||
scikit-learn==0.24.1 | ||
scipy==1.4.1 | ||
seaborn==0.11.1 | ||
Send2Trash==1.5.0 | ||
sentencepiece==0.1.95 | ||
setuptools==54.2.0 | ||
Shapely==1.7.1 | ||
six==1.15.0 | ||
sklearn==0.0 | ||
smart-open==5.2.1 | ||
snowballstemmer==2.1.0 | ||
spacy==3.1.3 | ||
spacy-legacy==3.0.8 | ||
Sphinx==4.1.0 | ||
sphinx-prompt==1.4.0 | ||
sphinx-rtd-theme==0.5.2 | ||
Sphinx-Substitution-Extensions==2020.9.30.0 | ||
sphinxcontrib-applehelp==1.0.2 | ||
sphinxcontrib-devhelp==1.0.2 | ||
sphinxcontrib-htmlhelp==2.0.0 | ||
sphinxcontrib-jsmath==1.0.1 | ||
sphinxcontrib-kroki==1.2.1 | ||
sphinxcontrib-qthelp==1.0.3 | ||
sphinxcontrib-serializinghtml==1.1.5 | ||
srsly==2.4.1 | ||
tensorboard==2.5.0 | ||
tensorboard-data-server==0.6.1 | ||
tensorboard-plugin-wit==1.8.0 | ||
tensorboardX==2.4 | ||
tensorflow==2.5.1 | ||
tensorflow-addons==0.12.1 | ||
tensorflow-datasets==4.4.0 | ||
tensorflow-estimator==2.5.0 | ||
tensorflow-metadata==1.2.0 | ||
tensorflow-probability==0.11.1 | ||
termcolor==1.1.0 | ||
terminado==0.9.3 | ||
testpath==0.4.4 | ||
thinc==8.0.10 | ||
threadpoolctl==2.1.0 | ||
tifffile==2021.3.17 | ||
tokenizers==0.8.1rc2 | ||
toml==0.10.2 | ||
torch==1.7.0 | ||
torchvision==0.8.1 | ||
tornado==6.1 | ||
tqdm==4.59.0 | ||
traitlets==5.0.5 | ||
transformers==3.1.0 | ||
typeguard==2.12.0 | ||
typer==0.4.0 | ||
typing-extensions==3.7.4.3 | ||
uncertainty-calibration==0.0.8 | ||
urllib3==1.26.4 | ||
wasabi==0.8.2 | ||
wcwidth==0.2.5 | ||
webencodings==0.5.1 | ||
websocket-client==0.58.0 | ||
Werkzeug==1.0.1 | ||
wget==3.2 | ||
wheel==0.36.2 | ||
widgetsnbextension==3.5.1 | ||
wordfreq==2.5.1 | ||
wrapt==1.12.1 | ||
zipp==3.5.0 |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Oops, something went wrong.