Add: network inference - make_network workflow

segrelab · May 12, 2021 · 07181ff · 07181ff
1 parent 3063674
commit 07181ff
Showing 1 changed file with 5 additions and 4 deletions.
diff --git a/micone/pipelines/modules/network_inference/network/make_network.nf b/micone/pipelines/modules/network_inference/network/make_network.nf
@@ -1,10 +1,11 @@
 process make_network {
+    label 'micone'
     tag "$id"
-    publishDir "${output_dir}/${datatuple}", mode: 'copy', overwrite: true
+    publishDir "${params.output_dir}/${task.process}/${id}", mode: 'copy', overwrite: true
     input:
-    tuple val(id), val(datatuple), val(level), file(corr_file), file(pval_file), file(obsdata_file), file(childrenmap_file)
+        tuple val(id), val(datatuple), val(level), file(corr_file), file(pval_file), file(obsdata_file), file(childrenmap_file)
     output:
-    tuple val(id), file('*_network.json')
+        tuple val(id), file('*_network.json')
     script:
-    template 'network_inference/network/make_network.py'
+        template 'network_inference/network/make_network.py'
 }