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[FEATURE] SeqAn3: Develop info fields of the VCF parser. #10

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Irallia opened this issue Sep 24, 2020 · 0 comments · Fixed by #46
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[FEATURE] SeqAn3: Develop info fields of the VCF parser. #10

Irallia opened this issue Sep 24, 2020 · 0 comments · Fixed by #46
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Irallia commented Sep 24, 2020

VCF: Variant Call Format, a file format standard in bioinformatics.

Any key in the info field is allowed, although some subfields are reserved (albeit optional), see wikipedia:
https://en.wikipedia.org/wiki/Variant_Call_Format

We want to use an enum for the reserved subfields.
@Irallia Irallia changed the title [FEATURE] SeqAn: Develop info fields of the VCF parser. [FEATURE] SeqAn3: Develop info fields of the VCF parser. Sep 24, 2020
@Irallia Irallia mentioned this issue Oct 20, 2020
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@Irallia Irallia mentioned this issue Feb 10, 2021
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Add a skeleton VCF parser which can print variants in VCF output. joshuak94/iGenVar
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@Irallia @joshuak94