Migration to pyside6 #80
Workflow file for this run
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| name: Tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches-ignore: [] | |
| schedule: | |
| - cron: '0 0 13 * *' | |
| jobs: | |
| build-linux: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| max-parallel: 5 | |
| matrix: | |
| python: ['3.8', '3.9'] | |
| qt-api: ['pyside6'] | |
| fail-fast: false | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Setup ubuntu | |
| run: | | |
| sudo apt update -y --fix-missing | |
| sudo apt install -y build-essential | |
| sudo apt install -y xvfb libxkbcommon-x11-0 x11-xserver-utils | |
| sudo apt install libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-xinerama0 libxcb-xfixes0 libxcb-xkb-dev libxcb-cursor0 libxcb-shape0 | |
| sudo apt install graphviz | |
| sudo apt install libgl1 libgl1-mesa-glx libegl1 libgles2-mesa-dev libgl1-mesa-dev | |
| - name: Install dependencies | |
| run: | | |
| pip install .[testing] | |
| pip install sequana_fastqc | |
| - name: Lint with flake8 | |
| run: | | |
| pip install flake8 | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics --exclude '*/ui/' | |
| - name: Test with pytest | |
| env: | |
| QT_DEBUG_PLUGINS: 1 | |
| DISPLAY: ":99.0" | |
| QT_API: ${{ matrix.qt-api }} | |
| T_QPA_PLATFORM: offscreen | |
| run: | | |
| Xvfb :99 -screen 0 1024x768x24 > dev>null 2>&1 & | |
| # gives xvfb some time to start | |
| #sh -e /etc/init.d/xvfb start | |
| sleep 3 | |
| pytest -s --cov-report term-missing --cov=sequanix -v | |
| - name: coveralls | |
| run: | | |
| pip install coveralls | |
| coveralls --service=github | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} |