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seung-lab

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  1. connected-components-3d connected-components-3d Public

    Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

    C++ 359 43

  2. euclidean-distance-transform-3d euclidean-distance-transform-3d Public

    Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.

    C++ 235 37

  3. kimimaro kimimaro Public

    Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

    C++ 135 23

  4. cloud-volume cloud-volume Public

    Read and write Neuroglancer datasets programmatically.

    Python 130 45

  5. znn-release znn-release Public archive

    Multi-core CPU implementation of deep learning for 2D and 3D sliding window convolutional networks (ConvNets).

    C++ 94 33

  6. DracoPy DracoPy Public

    Python wrapper for Google's Draco mesh compression library.

    C++ 86 24

Repositories

Showing 10 of 179 repositories
  • abiss Public

    Affinity based image segmentation system

    seung-lab/abiss’s past year of commit activity
    C++ 3 GPL-3.0 1 0 1 Updated Sep 19, 2024
  • igneous Public

    Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.

    seung-lab/igneous’s past year of commit activity
    Python 43 GPL-3.0 17 18 4 Updated Sep 17, 2024
  • cloud-volume Public

    Read and write Neuroglancer datasets programmatically.

    seung-lab/cloud-volume’s past year of commit activity
    Python 130 BSD-3-Clause 45 73 4 Updated Sep 17, 2024
  • tile-transcoder Public

    Transfer and convert the file format of image tiles.

    seung-lab/tile-transcoder’s past year of commit activity
    Python 1 BSD-3-Clause 0 0 0 Updated Sep 13, 2024
  • seuron Public Forked from wongwill86/air-tasks

    SEUnglab neuRON pipeline

    seung-lab/seuron’s past year of commit activity
    Python 5 MIT 6 1 0 Updated Sep 11, 2024
  • pyfqmr-Fast-Quadric-Mesh-Reduction Public Forked from Kramer84/pyfqmr-Fast-Quadric-Mesh-Reduction

    Mesh triangle reduction using quadrics

    seung-lab/pyfqmr-Fast-Quadric-Mesh-Reduction’s past year of commit activity
    C++ 0 MIT 12 0 0 Updated Sep 11, 2024
  • cloud-files Public

    Threaded Python and CLI client library for AWS S3, Google Cloud Storage (GCS), in-memory, and the local filesystem.

    seung-lab/cloud-files’s past year of commit activity
    Python 38 BSD-3-Clause 8 14 0 Updated Sep 10, 2024
  • neuroglancer Public Forked from google/neuroglancer

    WebGL-based viewer for volumetric data

    seung-lab/neuroglancer’s past year of commit activity
    TypeScript 22 Apache-2.0 307 91 35 Updated Sep 5, 2024
  • seung-lab/ng-extend’s past year of commit activity
    TypeScript 4 7 3 26 Updated Aug 24, 2024
  • RealNeuralNetworks.jl Public

    A unified framework for skeletonization, morphological analysis, and connectivity analysis.

    seung-lab/RealNeuralNetworks.jl’s past year of commit activity
    Julia 38 Apache-2.0 2 17 4 Updated Aug 23, 2024

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