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Add updated A02 metadata
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This was done after small tweaks to tabby content (version string)
and location. Closes #42

Uses a new "semantic" sfb tab format.
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mslw committed Oct 26, 2023
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{"type": "dataset", "dataset_id": "5a11d594-243e-4ca3-819b-54d10c8d6b3f", "dataset_version": "3bf7173a55455c7dff0cefca1e3480861ab62372", "children": [{"type": "directory", "name": "projects", "path": "projects"}, {"type": "dataset", "name": "GCAMP7-OTC-AP-2KO_ataxia_model", "dataset_id": "e4cef344-a6bd-5002-b7cd-550b0486be01", "dataset_version": "408ae5bd16"}], "metadata_sources": {"key_source_map": {"type": ["metalad_core"], "dataset_id": ["tabby"], "dataset_version": ["metalad_core"], "url": ["metalad_core"], "authors": ["we_cff"], "subdatasets": ["metalad_core", "tabby"], "name": ["we_cff"], "description": ["we_cff"], "publications": ["we_ris", "we_crossref"], "keywords": ["manual_addition"], "funding": ["manual_addition"]}, "sources": [{"source_name": "metalad_core", "source_version": "1", "source_parameter": {}, "source_time": 1698336096.0861385, "agent_email": "m.szczepanik@fz-juelich.de", "agent_name": "Micha\u0142 Szczepanik"}, {"source_name": "we_cff", "source_version": "0.0.1", "source_parameter": {}, "source_time": 1698336096.4701638, "agent_email": "m.szczepanik@fz-juelich.de", "agent_name": "Micha\u0142 Szczepanik"}, {"source_name": "we_ris", "source_version": "0.8.1", "source_parameter": {}, "source_time": 1698336096.8495364, "agent_email": "m.szczepanik@fz-juelich.de", "agent_name": "Micha\u0142 Szczepanik"}, {"source_name": "we_nbib", "source_version": "0.3.2", "source_parameter": {}, "source_time": 1698336097.1887138, "agent_email": "m.szczepanik@fz-juelich.de", "agent_name": "Micha\u0142 Szczepanik"}, {"source_name": "we_crossref", "source_version": "0.0.1", "source_parameter": {}, "source_time": 1698336097.5815635, "agent_email": "m.szczepanik@fz-juelich.de", "agent_name": "Micha\u0142 Szczepanik"}, {"source_name": "manual_addition", "source_version": "0.1.0", "source_parameter": {}, "source_time": 1698336097.773074, "agent_name": "Micha\u0142 Szczepanik", "agent_email": "m.szczepanik@fz-juelich.de"}, {"source_name": "tabby", "source_version": "0.1.0", "source_parameter": {}, "source_time": 1698337562.38772, "agent_name": "Micha\u0142 Szczepanik", "agent_email": "m.szczepanik@fz-juelich.de"}]}, "url": ["https://github.com/sfb1451/projects-A02.git"], "authors": [{"givenName": "Natalia", "familyName": "Kononenko"}, {"givenName": "Marianna", "familyName": "Tolve"}, {"givenName": "Melina", "familyName": "Overhoff"}], "subdatasets": [{"dataset_id": "ee7cbadc-958f-40f2-85f9-8c75835047fd", "dataset_version": "408ae5bd168465c232d8ddb83c5fc14fd9c43326", "dataset_path": "projects/gcamp7/input/data", "dirs_from_path": ["projects", "gcamp7", "input", "data"]}, {"dataset_id": "7d4af6bf-683d-4580-856a-6c0502dd01e5", "dataset_version": "1a921b9e514f8892dc82edcac722f7b562498a0a", "dataset_path": "projects/gcamp7/output/image-stacks", "dirs_from_path": ["projects", "gcamp7", "output", "image-stacks"]}, {"dataset_id": "c1092bba-56bc-4279-b33f-c152312b3bed", "dataset_version": "6de920fd71aa56d17be23db487bbec99fbea96b8", "dataset_path": "projects/gcamp7/output/plots", "dirs_from_path": ["projects", "gcamp7", "output", "plots"]}, {"dataset_path": "GCAMP7-OTC-AP-2KO_ataxia_model", "dataset_id": "e4cef344-a6bd-5002-b7cd-550b0486be01", "dataset_version": "408ae5bd16", "dirs_from_path": ["GCAMP7-OTC-AP-2KO_ataxia_model"]}], "name": "A02: Dysregulation of the autophagy-endolysosomal system as a putative pathological mechanism behind the motor control dysfunction", "description": "Project A02 investigates the role of the autophagy-endolysosomal system in the maintenance of voluntary motor control in the cerebellum and basal ganglia employing genetic mouse models. The project aims at elucidating whether voluntary motor control defects in mice lacking major endocytic complex AP-2 or crucial autophagy protein ATG5 are a result of their novel non-canonical roles in axonal trafficking and regulation of gene transcription.", "publications": [{"type": "Journal Article", "title": "Autophagy regulates neuronal excitability by controlling cAMP/protein kinase A signaling at the synapse", "doi": "https://doi.org/10.15252/embj.2022110963", "datePublished": "2022", "authors": [{"name": "Overhoff, Melina"}, {"name": "Tellkamp, Frederik"}, {"name": "Hess, Simon"}, {"name": "Tolve, Marianna"}, {"name": "Tutas, Janine"}, {"name": "Faerfers, Marcel"}, {"name": "Ickert, Lotte"}, {"name": "Mohammadi, Milad"}, {"name": "De Bruyckere, Elodie"}, {"name": "Kallergi, Emmanouela"}, {"name": "Delle Vedove, Andrea"}, {"name": "Nikoletopoulou, Vassiliki"}, {"name": "Wirth, Brunhilde"}, {"name": "Isensee, Joerg"}, {"name": "Hucho, Tim"}, {"name": "Puchkov, Dmytro"}, {"name": "Isbrandt, Dirk"}, {"name": "Krueger, Marcus"}, {"name": "Kloppenburg, Peter"}, {"name": "Kononenko, Natalia L"}], "publicationOutlet": "The EMBO Journal"}, {"type": "Journal Article", "title": "Brain\u2010specific functions of the endocytic machinery", "doi": "https://doi.org/10.1111/febs.15897", "datePublished": 2021, "authors": [{"givenName": "Santiago", "familyName": "Camblor\u2010Perujo", "name": "Santiago Camblor\u2010Perujo", "identifiers": [{"type": "ORCID", "identifier": "0000-0003-3345-428X"}]}, {"givenName": "Natalia L.", "familyName": "Kononenko", "name": "Natalia L. Kononenko", "identifiers": [{"type": "ORCID", "identifier": "0000-0002-3425-6659"}]}], "publicationOutlet": "The FEBS Journal"}], "keywords": ["ataxia", "cerebellum", "endocytosis", "GRID2", "3D Reconstruction", "synapse", "AP-2"], "funding": [{"name": "Deutsche Forschungsgemeinschaft (DFG)", "identifier": "Project number 431549029", "description": "SFB1451: Key mechanisms of motor control in health and disease"}]}
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{"type": "directory", "dataset_id": "5a11d594-243e-4ca3-819b-54d10c8d6b3f", "dataset_version": "3bf7173a55455c7dff0cefca1e3480861ab62372", "children": [{"type": "dataset", "name": "data", "path": "projects/gcamp7/input/data", "dataset_id": "ee7cbadc-958f-40f2-85f9-8c75835047fd", "dataset_version": "408ae5bd168465c232d8ddb83c5fc14fd9c43326"}], "path": "projects/gcamp7/input", "name": "input"}
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{"type": "directory", "dataset_id": "5a11d594-243e-4ca3-819b-54d10c8d6b3f", "dataset_version": "3bf7173a55455c7dff0cefca1e3480861ab62372", "children": [{"type": "directory", "name": "input", "path": "projects/gcamp7/input"}, {"type": "directory", "name": "output", "path": "projects/gcamp7/output"}], "path": "projects/gcamp7", "name": "gcamp7"}
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