Skip to content
No description, website, or topics provided.
Python C++ Makefile
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
sample
utilities
LICENSE
README.md
aws.md
benchmark.py
ref.py
samples.md
tools.py
usage.md

README.md

HTS Compression Benchmarking Suite

This is a set of scripts used for measuring the performance of high-throughput sequencing compression tools (i.e. tools compressing FASTQ or SAM files).

It has been published in Nature Methods (2016).

Tutorials

Please refer to the following documents for a detailed guide how to run benchmarks yourself.

A comprehensive database of available benchmarks is available here.

Contact

In case of questions or problems, feel free to contact me at inumanag at sfu dot oh canada.

License

MIT License

You can’t perform that action at this time.