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Randomisations - change p-rank approach, update GUI colouring like z-scores #856

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shawnlaffan opened this issue Mar 29, 2023 · 1 comment
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Randomisations - change p-rank approach, update GUI colouring like z-scores #856

shawnlaffan opened this issue Mar 29, 2023 · 1 comment
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@shawnlaffan
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enhancement GUI randomisations
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Release_4.3

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@shawnlaffan
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The p-rank lists in the randomisations can be confusing to users. These should be simplified so that all values are given, but values <0.5 take into account any ties.

The GUI should also colour the data using the same approach as for z-scores.
https://biodiverse-analysis-software.blogspot.com/2023/02/plotting-z-score-indices-and.html
@shawnlaffan shawnlaffan self-assigned this Mar 29, 2023
@shawnlaffan shawnlaffan added this to the Release_5.0 milestone Mar 29, 2023
shawnlaffan added a commit that referenced this issue Mar 30, 2023
@shawnlaffan
p-rank calcs: use refaliasing
0f2f9ee 
Updates #856
shawnlaffan added a commit that referenced this issue Mar 30, 2023
@shawnlaffan
Randomisations: Change p_rank calculations to retain all defined vals
ad39f28 
Now values within the 5-95 percentile range are kept
instead of being set to nodata.

Updates #856
@shawnlaffan shawnlaffan modified the milestones: Release_5.0, Release_4.3 Mar 30, 2023
shawnlaffan added a commit that referenced this issue Mar 30, 2023
@shawnlaffan
GUI: Display randomisation p_rank results using divergent colour scheme
95f1800 
This makes the p_rank results much easier to interpret.

Updates #856
Fixes #857 while we are about it.
@shawnlaffan shawnlaffan mentioned this issue Apr 3, 2023
Merged
shawnlaffan added a commit that referenced this issue Apr 3, 2023
@shawnlaffan
p-rank calcs: use refaliasing
0b6fa9c 
Updates #856
shawnlaffan added a commit that referenced this issue Apr 3, 2023
@shawnlaffan
Randomisations: Change p_rank calculations to retain all defined vals
0950be0 
Now values within the 5-95 percentile range are kept
instead of being set to nodata.

Updates #856
shawnlaffan added a commit that referenced this issue Apr 3, 2023
@shawnlaffan
GUI: Display randomisation p_rank results using divergent colour scheme
98ede59 
This makes the p_rank results much easier to interpret.

Updates #856
Fixes #857 while we are about it.
shawnlaffan added a commit that referenced this issue Apr 4, 2023
@shawnlaffan
Change the p-rank plotting thresholds to 0.1, 0.25, 0.5
e992316 
Updates #856
@shawnlaffan
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Changes are on master branch, so closing

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enhancement GUI randomisations
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