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Linux

Table of Contents

resources

Doc

tools

  • Snakemake - reduce the complexity of creating workflows by providing a fast and comfortable execution environment, together with a clean and modern domain specific specification language (DSL) in python style:
  • @bitslife Windows 平台下好用的终端,MobaXterm, 可以apt-get install 一些linux 下工具,比如 clang, 想在Windows上学习Linux,可以不用 MinGW 或者安装虚拟机了, Windows下学习生物信息的筒子们可以尝试下了。亲测,很好用。
  • command_line_bootcamp Command-line bootcamp adventure in your browser.
  • memusg - A 'time'-like utility for Unix that measures peak memory usage
  • ranger -  file manager
  • The ultimate Vim configuration: vimrc
  • trash-cli -  Command line interface to the freedesktop.org trashcan. 避免rm -rf / 的悲剧,参考中文介绍
  • Bashmarks is a shell script that allows you to save and jump to commonly used directories
  • dirsize -  Summarize size of directories and files in directories。我自己写的
  • brename -  Recursively batch rename files and directories by regular expression。我自己写的
  • peco -  Simplistic interactive filtering tool
  • httpie -  HTTPie is a command line HTTP client, a user-friendly cURL replacement
  • datamash -  GNU datamash is a command-line program which performs basic numeric,textual and statistical operations on input textual data files.
  • distribution -  Short, simple, direct scripts for creating ASCII graphical histograms in the terminal.
  • fdupes -  FDUPES is a program for identifying or deleting duplicate files residing within specified directories.
  • FSlint -  FSlint is a utility to find and clean various forms of lint on a filesystem.
  • pigz - A parallel implementation of gzip for modern multi-processor, multi-core machines
  • install font to support emoji : gdouros-symbola-fonts

shell