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Fix typo in README
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sherrillmix committed Dec 14, 2023
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2 changes: 1 addition & 1 deletion README.Rmd
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Expand Up @@ -593,7 +593,7 @@ makeNewick(taxa,excludeTerminalNAs=TRUE)

Note that taxa may be the most specific taxon for a given taxa in the taxonomy matrix but will not be a leaf in the resulting tree if it appears in other taxonomy e.g. Chordata in this example.

## Note: NCBI Name changes in early 2023
## Note: NCBI name changes in early 2023

Please note that the [NCBI change their naming of several major prokaryote phylums](https://ncbiinsights.ncbi.nlm.nih.gov/2022/11/14/prokaryotic-phylum-name-changes/) e.g. [Firmicutes became Bacillota](https://ftp.ncbi.nih.gov/pub/taxonomy/Major_taxonomic_updates_2023.txt) in early 2023.
Please watch out for any problems that could arise. For example:
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -657,7 +657,7 @@ makeNewick(taxa,excludeTerminalNAs=TRUE)

Note that taxa may be the most specific taxon for a given taxa in the taxonomy matrix but will not be a leaf in the resulting tree if it appears in other taxonomy e.g. Chordata in this example.

## Note: NCBI Name changes in early 2023
## Note: NCBI name changes in early 2023

Please note that the [NCBI change their naming of several major prokaryote phylums](https://ncbiinsights.ncbi.nlm.nih.gov/2022/11/14/prokaryotic-phylum-name-changes/) e.g. [Firmicutes became Bacillota](https://ftp.ncbi.nih.gov/pub/taxonomy/Major_taxonomic_updates_2023.txt) in early 2023.
Please watch out for any problems that could arise. For example:
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2 changes: 1 addition & 1 deletion docs/articles/usage.html

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2 changes: 1 addition & 1 deletion docs/index.html

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2 changes: 1 addition & 1 deletion docs/pkgdown.yml
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Expand Up @@ -3,5 +3,5 @@ pkgdown: 2.0.7
pkgdown_sha: ~
articles:
usage: usage.html
last_built: 2023-12-14T16:28Z
last_built: 2023-12-14T18:29Z

2 changes: 1 addition & 1 deletion docs/reference/streamingRead.html

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2 changes: 1 addition & 1 deletion vignettes/usage.Rmd
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Expand Up @@ -599,7 +599,7 @@ makeNewick(taxa,excludeTerminalNAs=TRUE)

Note that taxa may be the most specific taxon for a given taxa in the taxonomy matrix but will not be a leaf in the resulting tree if it appears in other taxonomy e.g. Chordata in this example.

## Note: NCBI Name changes in early 2023
## Note: NCBI name changes in early 2023

Please note that the [NCBI change their naming of several major prokaryote phylums](https://ncbiinsights.ncbi.nlm.nih.gov/2022/11/14/prokaryotic-phylum-name-changes/) e.g. [Firmicutes became Bacillota](https://ftp.ncbi.nih.gov/pub/taxonomy/Major_taxonomic_updates_2023.txt) in early 2023.
Please watch out for any problems that could arise. For example:
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