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Plant Growth Promotion Assay Data for Mucilage Isolate Genomes

R analysis of data from phenotypic assays of mucilage isolates screening for plant growth promotion traits.

R session info

R version 3.5.1 (2018-07-02)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS  10.15.3

Matrix products: default
BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods
[8] base

other attached packages:
 [1] ggrepel_0.8.1         cowplot_1.0.0         RColorBrewer_1.1-2
 [4] randomcoloR_1.1.0     viridis_0.5.1         viridisLite_0.3.0
 [7] circlize_0.4.8        ape_5.3               dendextend_1.12.0
[10] forcats_0.4.0         stringr_1.4.0         dplyr_0.8.3
[13] purrr_0.3.3           readr_1.3.1           tidyr_1.0.0
[16] tibble_2.1.3          ggplot2_3.2.1         tidyverse_1.2.1
[19] ComplexHeatmap_1.20.0 ggnewscale_0.4.0      ggtree_1.14.6
[22] treeio_1.6.2

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.2          lubridate_1.7.4     lattice_0.20-38
 [4] V8_2.3              assertthat_0.2.1    zeallot_0.1.0
 [7] R6_2.4.0            cellranger_1.1.0    backports_1.1.5
[10] httr_1.4.1          pillar_1.4.2        GlobalOptions_0.1.1
[13] rlang_0.4.0         curl_4.2            lazyeval_0.2.2
[16] readxl_1.3.1        rstudioapi_0.10     GetoptLong_0.1.7
[19] Rtsne_0.15          munsell_0.5.0       broom_0.5.2
[22] compiler_3.5.1      modelr_0.1.5        xfun_0.10
[25] pkgconfig_2.0.3     shape_1.4.4         tidyselect_0.2.5
[28] gridExtra_2.3       crayon_1.3.4        withr_2.1.2
[31] nlme_3.1-141        jsonlite_1.6        gtable_0.3.0
[34] lifecycle_0.1.0     magrittr_1.5        scales_1.0.0
[37] tidytree_0.2.8      cli_1.1.0           stringi_1.4.3
[40] xml2_1.2.2          rvcheck_0.1.5       generics_0.0.2
[43] vctrs_0.2.0         rjson_0.2.20        tools_3.5.1
[46] glue_1.3.1          hms_0.5.1           parallel_3.5.1
[49] yaml_2.2.0          colorspace_1.4-1    cluster_2.1.0
[52] BiocManager_1.30.8  rvest_0.3.4         knitr_1.25
[55] haven_2.1.1

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R Analysis of phenotypic assay data screening mucilage isolates for plant growth promotion traits

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