GitHub - shigdon/R-alt-nif-analysis: Code for alternative nif Gene mining analysis

Alternative nif gene analysis of Mucilage Isolate Genomes

R analysis of data output from hmmscans of Mucilage Isolate whole genome sequences

Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
NIFscan_v2_output/TIGRFAM_39_nif		NIFscan_v2_output/TIGRFAM_39_nif
meta_files		meta_files
sourmash_data		sourmash_data
.gitignore		.gitignore
R-alt-nif-analysis.Rproj		R-alt-nif-analysis.Rproj
README.md		README.md
alt-nif-analysis.Rmd		alt-nif-analysis.Rmd
alt_nif_isolate_ids.txt		alt_nif_isolate_ids.txt
alt_nif_isolate_mono_prok_ids.txt		alt_nif_isolate_mono_prok_ids.txt
isolate_id_map.txt		isolate_id_map.txt