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With Octave on Ubuntu 16.04: Stuck in installation at cmake #4396

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carbonox-infernox opened this issue Sep 7, 2018 · 2 comments
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@carbonox-infernox
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carbonox-infernox commented Sep 7, 2018

I am following the instructions here: http://www.shogun-toolbox.org/install#manual-basics

When i do cmake .. -DINTERFACE_OCTAVE=ON

I get the error
CMake Error at /usr/share/cmake-3.5/Modules/FindPackageHandleStandardArgs.cmake:148 (message): Could NOT find Octave (missing: OCTAVE_ROOT_DIR) (found suitable version "4.4.1", minimum required is "3.6") Call Stack (most recent call first): /usr/share/cmake-3.5/Modules/FindPackageHandleStandardArgs.cmake:388 (_FPHSA_FAILURE_MESSAGE) cmake/FindOctave.cmake:189 (find_package_handle_standard_args) src/interfaces/octave/CMakeLists.txt:1 (FIND_PACKAGE)

@lisitsyn
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lisitsyn commented Sep 7, 2018

I checked this thing and the reason is that OCTAVE_ROOT_DIR is detected via octave-config -p PREFIX which is not supported anymore. I didn't find any mentions of that in CHANGELOG of Octave but I guess we should adapt FindOctave. Luckily, this directory seems to be unused. This means deleting it from the argument list of find_package_handle_standard_args should help.

@carbonox-infernox
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The problem now is that it fails during make. I got it up to 75% on the 2nd or 3rd try, but now every time i run it it only makes it to 2%. I'll copy the error message:

[ 2%] Building CXX object src/shogun/CMakeFiles/libshogun.dir/base/class_list.cpp.o In file included from /home/derose/shogun/src/shogun/kernel/normalizer/KernelNormalizer.h:12:0, from /home/derose/shogun/src/shogun/transfer/multitask/MultitaskKernelMaskPairNormalizer.h:12, from /home/derose/shogun/build/src/shogun/base/class_list.cpp:40: /home/derose/shogun/src/shogun/kernel/Kernel.h: In member function ‘float64_t shogun::CKernel::kernel(int32_t, int32_t)’: /home/derose/shogun/src/shogun/kernel/Kernel.h:208:21: error: invalid use of incomplete type ‘class shogun::CKernelNormalizer’ return normalizer->normalize(compute(idx_a, idx_b), idx_a, idx_b); ^ In file included from /home/derose/shogun/src/shogun/kernel/normalizer/KernelNormalizer.h:12:0, from /home/derose/shogun/src/shogun/transfer/multitask/MultitaskKernelMaskPairNormalizer.h:12, from /home/derose/shogun/build/src/shogun/base/class_list.cpp:40: /home/derose/shogun/src/shogun/kernel/Kernel.h:30:8: note: forward declaration of ‘class shogun::CKernelNormalizer’ class CKernelNormalizer; ^ src/shogun/CMakeFiles/libshogun.dir/build.make:17337: recipe for target 'src/shogun/CMakeFiles/libshogun.dir/base/class_list.cpp.o' failed make[2]: *** [src/shogun/CMakeFiles/libshogun.dir/base/class_list.cpp.o] Error 1 CMakeFiles/Makefile2:132: recipe for target 'src/shogun/CMakeFiles/libshogun.dir/all' failed make[1]: *** [src/shogun/CMakeFiles/libshogun.dir/all] Error 2 Makefile:149: recipe for target 'all' failed make: *** [all] Error 2

@vigsterkr vigsterkr added this to To do in Release 7.0.0 Jan 11, 2019
@vigsterkr vigsterkr moved this from To do to In progress in Release 7.0.0 Feb 1, 2019
vigsterkr added a commit that referenced this issue Feb 1, 2019
@vigsterkr vigsterkr moved this from In progress to Done in Release 7.0.0 Feb 1, 2019
vigsterkr added a commit to vigsterkr/shogun that referenced this issue Mar 9, 2019
ktiefe pushed a commit to ktiefe/shogun that referenced this issue Jul 30, 2019
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