Analysis package for the paper Matty et al. (2022).
This code was written and used to analyze tracks of midpoints of populations of C. elegans in a sensory integration assay. Most of this code is only useful for this particular set of experiments and will need to be adapted for other uses.
I used the following software for analysis and figure production:
- WormLab
- MATLAB 2021a
- Adobe Illustrator CC 2021
- GraphPad Prism
Pool all experiments and plot in MATLAB
trackingAnalysis.m
: accumulates all of the midpoints from WormLab and video files for each experiment; produces all of the graphs for Figure 2 and Figure Supplements 3 and 4, saves data used in figures as.xlsx
for statistics.
- Paper: https://www.biorxiv.org/content/10.1101/156109v2
- Git Repository: https://github.com/shreklab/Matty-et-al-2022
- Related projects: https://github.com/shreklab
If you are having issues or have questions about the code, please contact jahaley at ucsd.edu.