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@shuzhao-li-lab

shuzhao-li-lab

README.md

Computational Metabolomics

The Shuzhao Li lab at The Jackson Laboratory for Genomic Medicine, Connecticut combine experimental approaches with computational algorithms that identify pathway patterns and integrate chemical reactions and biology. High-resolution mass spectrometry measures the metabolome, lipidome and small molecules of dietary, microbial and environmental origins. This information fills a major gap between genome and environment, revolutionizing biochemistry with broad applications to human health.

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  1. asari asari Public

    asari, metabolomics data preprocessing

    Python 32 9

  2. khipu khipu Public

    a Python library for generalized, low-level annotation of MS metabolomics

    Python 5 1

  3. PythonCentricPipelineForMetabolomics PythonCentricPipelineForMetabolomics Public

    Python pipeline for metabolomics data preprocessing, QC, standardization and annotation

    Jupyter Notebook 5

  4. metDataModel metDataModel Public

    Data models for metabolomics, made to reuse

    Python 2 1

  5. espol-workshop espol-workshop Public

    5-day workshop on Metabolomics and Data Analysis

    HTML 16 6

  6. JMS JMS Public

    Json's Metabolite Services

    Python 1 1

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