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@@ -7,3 +7,4 @@ git+git://github.com/simpeg/simpeg.git@dev | |
sphinx | ||
sphinx_rtd_theme | ||
nbsphinx | ||
testipynb |
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@@ -3,4 +3,5 @@ scipy | |
matplotlib | ||
ipywidgets | ||
jupyter | ||
git+git://github.com/simpeg/simpeg.git@dev | ||
discretize | ||
SimPEG |
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@@ -1,68 +1,17 @@ | ||
import unittest | ||
import sys | ||
import os | ||
import subprocess | ||
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# Testing for the notebooks - use nbconvert to execute all cells of the | ||
# notebook | ||
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TESTDIR = os.path.abspath(__file__) | ||
NBDIR = os.path.sep.join(TESTDIR.split(os.path.sep)[:-2]) # where are the notebooks? | ||
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def setUp(): | ||
nbpaths = [] # list of notebooks, with file paths | ||
nbnames = [] # list of notebook names (for making the tests) | ||
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# walk the test directory and find all notebooks | ||
for dirname, dirnames, filenames in os.walk(NBDIR): | ||
for filename in filenames: | ||
if filename.endswith('.ipynb') and not filename.endswith('-checkpoint.ipynb'): | ||
nbpaths.append(os.path.abspath(dirname) + os.path.sep + filename) # get abspath of notebook | ||
nbnames.append(''.join(filename[:-6])) # strip off the file extension | ||
return nbpaths, nbnames | ||
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def get(nbname, nbpath): | ||
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# use nbconvert to execute the notebook | ||
def test_func(self): | ||
print '\n--------------- Testing {0} ---------------'.format(nbname) | ||
print ' {0}'.format(nbpath) | ||
nbexe = subprocess.Popen(['jupyter', 'nbconvert', '{0}'.format(nbpath), | ||
'--execute', | ||
'--ExecutePreprocessor.timeout=120'], | ||
stdin=subprocess.PIPE, stdout=subprocess.PIPE, | ||
stderr=subprocess.PIPE) | ||
output, err = nbexe.communicate() | ||
check = nbexe.returncode | ||
if check == 0: | ||
print '\n ..... {0} Passed ..... \n'.format(nbname) | ||
else: | ||
print '\n <<<<< {0} FAILED >>>>> \n'.format(nbname) | ||
print 'Captured Output: \n {0}'.format(err) | ||
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self.assertTrue(check == 0) | ||
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return test_func | ||
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def tearDown(): | ||
subprocess.call(['find', '{0}'.format(os.path.sep.join(TESTDIR.split(os.path.sep)[:-1])), | ||
'-type', 'f', '-name', '*.html', '-delete']) | ||
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attrs = dict() | ||
nbpaths, nbnames = setUp() | ||
import testipynb | ||
import unittest | ||
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# build test for each notebook | ||
for i, nb in enumerate(nbnames): | ||
attrs['test_'+nb] = get(nb, nbpaths[i]) | ||
NBDIR = os.path.sep.join( | ||
os.path.abspath(__file__).split(os.path.sep)[:-2] + ['notebooks'] | ||
) | ||
# IGNORE = ["TEM_VerticalConductor_1D_stiched_invrsion"] | ||
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# create class to unit test notebooks | ||
TestNotebooks = type('TestNotebooks', (unittest.TestCase,), attrs) | ||
class TestNotebooks(unittest.TestCase): | ||
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def test_notebooks(self): | ||
Test = testipynb.TestNotebooks(directory=NBDIR, timeout=1800) | ||
self.assertTrue(Test.run_tests()) | ||
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if __name__ == '__main__': | ||
if __name__ == "__main__": | ||
unittest.main() | ||
tearDown() |