Merge pull request #2 from simphony/common-update

Updated simphony-common to recent commit id

.travis.yml

@@ -9,9 +9,12 @@ cache:
 
 env:
   - SIMPHONY_VERSION=master
+  - SIMPHONY_VERSION=0.3.0
+  - SIMPHONY_VERSION=413eb6f5683c4733b943c300c3192265c79ac26b
 matrix:
   allow_failures:
     - env: SIMPHONY_VERSION=master
+    - env: SIMPHONY_VERSION=0.3.0
 
 before_install:
   - sudo apt-get update -qq

bench/wrapper_bench.py

@@ -65,8 +65,8 @@ def describe(name, number_particles, number_steps, is_internal):
 def run_test(func, wrapper):
     func(wrapper)
 
-if __name__ == '__main__':
 
+if __name__ == '__main__':
     run_wrapper_tests = [_Tests(method=run,
                                 name="run"),
                          _Tests(method=run_iterate,

doc/source/conf.py

@@ -33,8 +33,8 @@ def __getattr__(cls, name):
     sys.modules.update((mod_name, Mock()) for mod_name in MOCK_MODULES)
     print 'mocking modules {}'.format(MOCK_MODULES)
 
-# -- General configuration ------------------------------------------------
 
+# -- General configuration ------------------------------------------------
 # check and mock missing modules
 mock_modules()
 

setup.py

@@ -33,6 +33,6 @@ def write_version_py(filename=None):
     entry_points={
         'simphony.engine': ['liggghts = simliggghts']},
     packages=find_packages(),
-    install_requires=["simphony >= 0.2.0",
+    install_requires=["simphony >= 0.3.0",
                       "pyyaml >= 3.11"]
     )

simliggghts/common/atom_style.py

@@ -7,6 +7,7 @@ class AtomStyle(Enum):
     """
     GRANULAR = 1
 
+
 # mapping from liggghts style to AtomStyle
 LIGGGHTS_STYLE = {'granular': AtomStyle.GRANULAR}
 

simliggghts/common/atom_style_description.py

@@ -64,6 +64,7 @@ def __init__(self,
         self.convert_to_cuba = convert_to_cuba
         self.convert_from_cuba = convert_from_cuba
 
+
 # description of each atom-style
 ATOM_STYLE_DESCRIPTIONS = {
     AtomStyle.GRANULAR:

simliggghts/io/tests/test_liggghts_simple_data_handler.py

@@ -49,6 +49,7 @@ def _write_example_file(filename, contents):
     with open(filename, "w") as text_file:
             text_file.write(contents)
 
+
 _data_file_contents = """LIGGGHTS data file via write_data, version 28 Jun 2014, timestep = 0
 
 4 atoms