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multicore = TRUE
I receive the following error when using multiple imputation and multicore = TRUE on Windows:
Error in checkForRemoteErrors(val): one node produced an error: no method found for function 'coef' and signature lavaan.mi
Here's a reprex:
library("lavaan") #> This is lavaan 0.6-12 #> lavaan is FREE software! Please report any bugs. library("semTools") #> #> ############################################################################### #> This is semTools 0.5-6 #> All users of R (or SEM) are invited to submit functions or ideas for functions. #> ############################################################################### library("simsem") #> #> ################################################################# #> This is simsem 0.5-16 #> simsem is BETA software! Please report any bugs. #> simsem was first developed at the University of Kansas Center for #> Research Methods and Data Analysis, under NSF Grant 1053160. #> ################################################################# #> #> Attaching package: 'simsem' #> The following object is masked from 'package:lavaan': #> #> inspect # Specify population model populationModel <- ' #Factor loadings ind60 =~ .75*x1 + .75*x2 + .75*x3 dem60 =~ .75*y1 + .75*y2 + .75*y3 + .75*y4 dem65 =~ .75*y5 + .75*y6 + .75*y7 + .75*y8 #Specify regression coefficients dem60 ~ .4*ind60 dem65 ~ .2*ind60 + .45*dem60 #Fix latent means to zero ind60 ~ 0 dem60 ~ 0 dem65 ~ 0 #Fix latent variances to one ind60 ~~ 1*ind60 dem60 ~~ 1*dem60 dem65 ~~ 1*dem65 #Specify residual variances of manifest variables x1 ~~ (1-.75^2)*x1 x2 ~~ (1-.75^2)*x2 x3 ~~ (1-.75^2)*x3 y1 ~~ (1-.75^2)*y1 y2 ~~ (1-.75^2)*y2 y3 ~~ (1-.75^2)*y3 y4 ~~ (1-.75^2)*y4 y5 ~~ (1-.75^2)*y5 y6 ~~ (1-.75^2)*y6 y7 ~~ (1-.75^2)*y7 y8 ~~ (1-.75^2)*y8 #Specify intercepts of manifest variables x1 ~ 0*1 x2 ~ 0*1 x3 ~ 0*1 y1 ~ 0*1 y2 ~ 0*1 y3 ~ 0*1 y4 ~ 0*1 y5 ~ 0*1 y6 ~ 0*1 y7 ~ 0*1 y8 ~ 0*1 ' populationModelFit <- lavaan(populationModel, do.fit = FALSE) # Specify analysis model analysisModelSyntax <- ' #Factor loadings ind60 =~ NA*x1 + x2 + x3 dem60 =~ NA*y1 + y2 + y3 + y4 dem65 =~ NA*y5 + y6 + y7 + y8 #Regression paths dem60 ~ ind60 dem65 ~ ind60 + dem60 #Fix latent means to zero ind60 ~ 0 dem60 ~ 0 dem65 ~ 0 #Fix latent variances to one ind60 ~~ 1*ind60 dem60 ~~ 1*dem60 dem65 ~~ 1*dem65 #Estimate residual variances of manifest variables x1 ~~ x1 x2 ~~ x2 x3 ~~ x3 y1 ~~ y1 y2 ~~ y2 y3 ~~ y3 y4 ~~ y4 y5 ~~ y5 y6 ~~ y6 y7 ~~ y7 y8 ~~ y8 #Free intercepts of manifest variables x1 ~ intx1*1 x2 ~ intx2*1 x3 ~ intx3*1 y1 ~ inty1*1 y2 ~ inty2*1 y3 ~ inty3*1 y4 ~ inty4*1 y5 ~ inty5*1 y6 ~ inty6*1 y7 ~ inty7*1 y8 ~ inty8*1 ' numberOfIndicators <- length(fitted(populationModelFit)$mean) indicatorDistributions <- bindDist(p = numberOfIndicators, skewness = rep(2.5, 11), kurtosis = rep(5, 11)) percentMissingByVariable <- ' x1 ~ p(0.10) x2 ~ p(0.10) x3 ~ p(0.10) y1 ~ p(0.10) y2 ~ p(0.10) y3 ~ p(0.10) y4 ~ p(0.10) y5 ~ p(0.10) y6 ~ p(0.10) y7 ~ p(0.10) y8 ~ p(0.10) ' missingnessModelMI <- miss(logit = percentMissingByVariable, m = 5) output <- simsem::sim(n = 100, model = analysisModelSyntax, generate = populationModel, miss = missingnessModelMI, seed = 52242, multicore = TRUE) #> Progress tracker is not available when 'multicore' is TRUE. #> Error in checkForRemoteErrors(val): one node produced an error: no method found for function 'coef' and signature lavaan.mi sessionInfo() #> R version 4.2.0 (2022-04-22 ucrt) #> Platform: x86_64-w64-mingw32/x64 (64-bit) #> Running under: Windows 10 x64 (build 19044) #> #> Matrix products: default #> #> Random number generation: #> RNG: L'Ecuyer-CMRG #> Normal: Inversion #> Sample: Rejection #> #> locale: #> [1] LC_COLLATE=English_United States.utf8 #> [2] LC_CTYPE=English_United States.utf8 #> [3] LC_MONETARY=English_United States.utf8 #> [4] LC_NUMERIC=C #> [5] LC_TIME=English_United States.utf8 #> #> attached base packages: #> [1] stats graphics grDevices utils datasets methods base #> #> other attached packages: #> [1] simsem_0.5-16 semTools_0.5-6 lavaan_0.6-12 #> #> loaded via a namespace (and not attached): #> [1] styler_1.7.0 zoo_1.8-10 xfun_0.31 purrr_0.3.4 #> [5] splines_4.2.0 lattice_0.20-45 vctrs_0.4.1 snow_0.4-4 #> [9] htmltools_0.5.2 stats4_4.2.0 yaml_2.3.5 utf8_1.2.2 #> [13] survival_3.3-1 rlang_1.0.3 R.oo_1.25.0 pillar_1.7.0 #> [17] glue_1.6.2 withr_2.5.0 R.utils_2.12.0 emmeans_1.7.5 #> [21] multcomp_1.4-19 R.cache_0.15.0 lifecycle_1.0.1 stringr_1.4.0 #> [25] R.methodsS3_1.8.2 mvtnorm_1.1-3 codetools_0.2-18 coda_0.19-4 #> [29] evaluate_0.15 knitr_1.39 fastmap_1.1.0 parallel_4.2.0 #> [33] fansi_1.0.3 highr_0.9 TH.data_1.1-1 xtable_1.8-4 #> [37] fs_1.5.2 mnormt_2.1.0 digest_0.6.29 stringi_1.7.6 #> [41] grid_4.2.0 cli_3.3.0 tools_4.2.0 sandwich_3.0-2 #> [45] magrittr_2.0.3 tibble_3.1.7 crayon_1.5.1 pbivnorm_0.6.0 #> [49] pkgconfig_2.0.3 ellipsis_0.3.2 MASS_7.3-57 Matrix_1.4-1 #> [53] estimability_1.4 reprex_2.0.1 rmarkdown_2.14 rstudioapi_0.13 #> [57] compiler_4.2.0
Created on 2022-07-07 by the reprex package (v2.0.1)
The text was updated successfully, but these errors were encountered:
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I receive the following error when using multiple imputation and
multicore = TRUE
on Windows:Here's a reprex:
Created on 2022-07-07 by the reprex package (v2.0.1)
The text was updated successfully, but these errors were encountered: