debug

Signed-off-by: vsoch <vsoch@users.noreply.github.com>

scripts/calculate_frequency.py

@@ -81,9 +81,8 @@ def main():
 
     # Allow developer to provide tags in root
     for filename in recursive_find(os.path.join(root), ".json"):
-        # json files at the root are not valid
-        dirname = os.path.dirname(filename)
-        if dirname == root:
+        # json files at the root are not valid        
+        if os.path.basename(filename) in ['skips.json', 'counts.json']:
             print(f"Skipping {filename}")
             continue
         aliases = read_json(filename)
@@ -93,7 +92,9 @@ def main():
             counts[alias] += 1
 
     counts = collections.OrderedDict(sorted(counts.items()))
-    write_json(counts, os.path.join(root, "counts.json"))
+    counts_file = os.path.join(root, "counts.json")
+    print(f'Writing counts to {counts_file}')
+    write_json(counts, counts_file)
 
 
 if __name__ == "__main__":

scripts/update_containers.py

@@ -197,6 +197,7 @@ def main():
         print(f"Retrieving tags for {image}")
         tags = requests.get(f"https://crane.ggcr.dev/ls/quay.io/biocontainers/{image}")
         tags = [x for x in tags.text.split("\n") if x]
+        print(tags)
         uris[image] = tags
 
         # If we couldn't get tags, add to skips and continue