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Automated deployment with new container 2022-11-09 (#7)
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279 changes: 279 additions & 0 deletions quay.io/biocontainers/b/bioconductor-asurat:1.2.0--r42hc247a5b_0.json
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{
".bioconductor-genomeinfodbdata-post-link.sh": "/usr/local/bin/.bioconductor-genomeinfodbdata-post-link.sh",
".bioconductor-genomeinfodbdata-pre-unlink.sh": "/usr/local/bin/.bioconductor-genomeinfodbdata-pre-unlink.sh",
"2to3": "/usr/local/bin/2to3",
"2to3-3.10": "/usr/local/bin/2to3-3.10",
"R": "/usr/local/bin/R",
"Rscript": "/usr/local/bin/Rscript",
"acountry": "/usr/local/bin/acountry",
"activate-global-python-argcomplete": "/usr/local/bin/activate-global-python-argcomplete",
"adig": "/usr/local/bin/adig",
"ahost": "/usr/local/bin/ahost",
"autopoint": "/usr/local/bin/autopoint",
"bunzip2": "/usr/local/bin/bunzip2",
"bzcat": "/usr/local/bin/bzcat",
"bzcmp": "/usr/local/bin/bzcmp",
"bzdiff": "/usr/local/bin/bzdiff",
"bzegrep": "/usr/local/bin/bzegrep",
"bzfgrep": "/usr/local/bin/bzfgrep",
"bzgrep": "/usr/local/bin/bzgrep",
"bzip2": "/usr/local/bin/bzip2",
"bzip2recover": "/usr/local/bin/bzip2recover",
"bzless": "/usr/local/bin/bzless",
"bzmore": "/usr/local/bin/bzmore",
"c_rehash": "/usr/local/bin/c_rehash",
"cairo-trace": "/usr/local/bin/cairo-trace",
"captoinfo": "/usr/local/bin/captoinfo",
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"compile_et": "/usr/local/bin/compile_et",
"curl": "/usr/local/bin/curl",
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"derb": "/usr/local/bin/derb",
"djpeg": "/usr/local/bin/djpeg",
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"ncursesw6-config": "/usr/local/bin/ncursesw6-config",
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"nghttp": "/usr/local/bin/nghttp",
"nghttpd": "/usr/local/bin/nghttpd",
"nghttpx": "/usr/local/bin/nghttpx",
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"openssl": "/usr/local/bin/openssl",
"pal2rgb": "/usr/local/bin/pal2rgb",
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"pango-segmentation": "/usr/local/bin/pango-segmentation",
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"pcre2-config": "/usr/local/bin/pcre2-config",
"pcre2_jit_test": "/usr/local/bin/pcre2_jit_test",
"pcre2grep": "/usr/local/bin/pcre2grep",
"pcre2test": "/usr/local/bin/pcre2test",
"pip": "/usr/local/bin/pip",
"pip3": "/usr/local/bin/pip3",
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"png-fix-itxt": "/usr/local/bin/png-fix-itxt",
"pngfix": "/usr/local/bin/pngfix",
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"pydoc": "/usr/local/bin/pydoc",
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"python": "/usr/local/bin/python",
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"python-argcomplete-tcsh": "/usr/local/bin/python-argcomplete-tcsh",
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"rdjpgcom": "/usr/local/bin/rdjpgcom",
"recode-sr-latin": "/usr/local/bin/recode-sr-latin",
"register-python-argcomplete": "/usr/local/bin/register-python-argcomplete",
"reset": "/usr/local/bin/reset",
"sclient": "/usr/local/bin/sclient",
"sed": "/usr/local/bin/sed",
"sim_client": "/usr/local/bin/sim_client",
"sqlite3_analyzer": "/usr/local/bin/sqlite3_analyzer",
"tabs": "/usr/local/bin/tabs",
"tclsh": "/usr/local/bin/tclsh",
"tclsh8.6": "/usr/local/bin/tclsh8.6",
"tic": "/usr/local/bin/tic",
"tiff2bw": "/usr/local/bin/tiff2bw",
"tiff2pdf": "/usr/local/bin/tiff2pdf",
"tiff2ps": "/usr/local/bin/tiff2ps",
"tiff2rgba": "/usr/local/bin/tiff2rgba",
"tiffcmp": "/usr/local/bin/tiffcmp",
"tiffcp": "/usr/local/bin/tiffcp",
"tiffcrop": "/usr/local/bin/tiffcrop",
"tiffdither": "/usr/local/bin/tiffdither",
"tiffdump": "/usr/local/bin/tiffdump",
"tiffinfo": "/usr/local/bin/tiffinfo",
"tiffmedian": "/usr/local/bin/tiffmedian",
"tiffset": "/usr/local/bin/tiffset",
"tiffsplit": "/usr/local/bin/tiffsplit",
"toe": "/usr/local/bin/toe",
"tomlq": "/usr/local/bin/tomlq",
"tput": "/usr/local/bin/tput",
"tset": "/usr/local/bin/tset",
"unlzma": "/usr/local/bin/unlzma",
"unxz": "/usr/local/bin/unxz",
"unzstd": "/usr/local/bin/unzstd",
"uuclient": "/usr/local/bin/uuclient",
"wheel": "/usr/local/bin/wheel",
"wish": "/usr/local/bin/wish",
"wish8.6": "/usr/local/bin/wish8.6",
"wrjpgcom": "/usr/local/bin/wrjpgcom",
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"x86_64-conda-linux-gnu-c++filt": "/usr/local/bin/x86_64-conda-linux-gnu-c++filt",
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"x86_64-conda-linux-gnu-c99": "/usr/local/bin/x86_64-conda-linux-gnu-c99",
"x86_64-conda-linux-gnu-cc": "/usr/local/bin/x86_64-conda-linux-gnu-cc",
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"x86_64-conda-linux-gnu-dwp": "/usr/local/bin/x86_64-conda-linux-gnu-dwp",
"x86_64-conda-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda-linux-gnu-elfedit",
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"x86_64-conda-linux-gnu-gprof": "/usr/local/bin/x86_64-conda-linux-gnu-gprof",
"x86_64-conda-linux-gnu-ld": "/usr/local/bin/x86_64-conda-linux-gnu-ld",
"x86_64-conda-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda-linux-gnu-ld.bfd",
"x86_64-conda-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda-linux-gnu-ld.gold",
"x86_64-conda-linux-gnu-nm": "/usr/local/bin/x86_64-conda-linux-gnu-nm",
"x86_64-conda-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda-linux-gnu-objcopy",
"x86_64-conda-linux-gnu-objdump": "/usr/local/bin/x86_64-conda-linux-gnu-objdump",
"x86_64-conda-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda-linux-gnu-ranlib",
"x86_64-conda-linux-gnu-readelf": "/usr/local/bin/x86_64-conda-linux-gnu-readelf",
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"x86_64-conda-linux-gnu-strings": "/usr/local/bin/x86_64-conda-linux-gnu-strings",
"x86_64-conda-linux-gnu-strip": "/usr/local/bin/x86_64-conda-linux-gnu-strip",
"x86_64-conda_cos6-linux-gnu-addr2line": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-addr2line",
"x86_64-conda_cos6-linux-gnu-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ar",
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"x86_64-conda_cos6-linux-gnu-dwp": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-dwp",
"x86_64-conda_cos6-linux-gnu-elfedit": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-elfedit",
"x86_64-conda_cos6-linux-gnu-f95": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-f95",
"x86_64-conda_cos6-linux-gnu-g++": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-g++",
"x86_64-conda_cos6-linux-gnu-gcc": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc",
"x86_64-conda_cos6-linux-gnu-gcc-ar": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ar",
"x86_64-conda_cos6-linux-gnu-gcc-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-nm",
"x86_64-conda_cos6-linux-gnu-gcc-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcc-ranlib",
"x86_64-conda_cos6-linux-gnu-gcov": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov",
"x86_64-conda_cos6-linux-gnu-gcov-dump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-dump",
"x86_64-conda_cos6-linux-gnu-gcov-tool": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gcov-tool",
"x86_64-conda_cos6-linux-gnu-gfortran": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gfortran",
"x86_64-conda_cos6-linux-gnu-gprof": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-gprof",
"x86_64-conda_cos6-linux-gnu-ld": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld",
"x86_64-conda_cos6-linux-gnu-ld.bfd": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.bfd",
"x86_64-conda_cos6-linux-gnu-ld.gold": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ld.gold",
"x86_64-conda_cos6-linux-gnu-nm": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-nm",
"x86_64-conda_cos6-linux-gnu-objcopy": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objcopy",
"x86_64-conda_cos6-linux-gnu-objdump": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-objdump",
"x86_64-conda_cos6-linux-gnu-ranlib": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-ranlib",
"x86_64-conda_cos6-linux-gnu-readelf": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-readelf",
"x86_64-conda_cos6-linux-gnu-size": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-size",
"x86_64-conda_cos6-linux-gnu-strings": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strings",
"x86_64-conda_cos6-linux-gnu-strip": "/usr/local/bin/x86_64-conda_cos6-linux-gnu-strip",
"xgettext": "/usr/local/bin/xgettext",
"xml2-config": "/usr/local/bin/xml2-config",
"xmlcatalog": "/usr/local/bin/xmlcatalog",
"xmllint": "/usr/local/bin/xmllint",
"xmlwf": "/usr/local/bin/xmlwf",
"xq": "/usr/local/bin/xq",
"xz": "/usr/local/bin/xz",
"xzcat": "/usr/local/bin/xzcat",
"xzcmp": "/usr/local/bin/xzcmp",
"xzdec": "/usr/local/bin/xzdec",
"xzdiff": "/usr/local/bin/xzdiff",
"xzegrep": "/usr/local/bin/xzegrep",
"xzfgrep": "/usr/local/bin/xzfgrep",
"xzgrep": "/usr/local/bin/xzgrep",
"xzless": "/usr/local/bin/xzless",
"xzmore": "/usr/local/bin/xzmore",
"yq": "/usr/local/bin/yq",
"zstd": "/usr/local/bin/zstd",
"zstdcat": "/usr/local/bin/zstdcat",
"zstdgrep": "/usr/local/bin/zstdgrep",
"zstdless": "/usr/local/bin/zstdless",
"zstdmt": "/usr/local/bin/zstdmt",
"env-execute": "/usr/local/env-execute"
}

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