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Automated deployment to update containers 2023-07-20 (#135)
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27 changes: 27 additions & 0 deletions quay.io/biocontainers/bioconductor-ahmassbank/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-ahmassbank
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-ahmassbank
latest:
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tags:
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docker: quay.io/biocontainers/bioconductor-ahmassbank
aliases:
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tjbench: /usr/local/bin/tjbench
2to3-3.11: /usr/local/bin/2to3-3.11
idle3.11: /usr/local/bin/idle3.11
pydoc3.11: /usr/local/bin/pydoc3.11
python3.11: /usr/local/bin/python3.11
python3.11-config: /usr/local/bin/python3.11-config
installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh
tomlq: /usr/local/bin/tomlq
xq: /usr/local/bin/xq
yq: /usr/local/bin/yq
jq: /usr/local/bin/jq
onig-config: /usr/local/bin/onig-config
activate-global-python-argcomplete: /usr/local/bin/activate-global-python-argcomplete
python-argcomplete-check-easy-install-script: /usr/local/bin/python-argcomplete-check-easy-install-script
register-python-argcomplete: /usr/local/bin/register-python-argcomplete
pandoc: /usr/local/bin/pandoc
python3.1: /usr/local/bin/python3.1
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url: https://biocontainers.pro/tools/bioconductor-alabaster.spatial
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-alabaster.spatial
latest:
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docker: quay.io/biocontainers/bioconductor-alabaster.spatial
aliases:
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MagickWand-config: /usr/local/bin/MagickWand-config
animate: /usr/local/bin/animate
composite: /usr/local/bin/composite
conjure: /usr/local/bin/conjure
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gs: /usr/local/bin/gs
gsbj: /usr/local/bin/gsbj
gsdj: /usr/local/bin/gsdj
26 changes: 26 additions & 0 deletions quay.io/biocontainers/bioconductor-alabaster.vcf/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-alabaster.vcf
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-alabaster.vcf
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jq: /usr/local/bin/jq
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register-python-argcomplete: /usr/local/bin/register-python-argcomplete
python3.1: /usr/local/bin/python3.1
12 changes: 12 additions & 0 deletions quay.io/biocontainers/bioconductor-cytopipeline/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-cytopipeline
maintainer: '@vsoch'
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35 changes: 35 additions & 0 deletions quay.io/biocontainers/bioconductor-escher/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-escher
maintainer: '@vsoch'
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MagickCore-config: /usr/local/bin/MagickCore-config
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montage: /usr/local/bin/montage
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pkg-config.bin: /usr/local/bin/pkg-config.bin
stream: /usr/local/bin/stream
compare: /usr/local/bin/compare
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eps2eps: /usr/local/bin/eps2eps
gs: /usr/local/bin/gs
gsbj: /usr/local/bin/gsbj
gsdj: /usr/local/bin/gsdj
11 changes: 11 additions & 0 deletions quay.io/biocontainers/bioconductor-flowgate/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-flowgate
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-flowgate
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28 changes: 28 additions & 0 deletions quay.io/biocontainers/bioconductor-msquality/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-msquality
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-msquality
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yq: /usr/local/bin/yq
jq: /usr/local/bin/jq
onig-config: /usr/local/bin/onig-config
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register-python-argcomplete: /usr/local/bin/register-python-argcomplete
pandoc: /usr/local/bin/pandoc
python3.1: /usr/local/bin/python3.1
26 changes: 26 additions & 0 deletions quay.io/biocontainers/bioconductor-outsplice/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-outsplice
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-outsplice
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python3.1: /usr/local/bin/python3.1
26 changes: 26 additions & 0 deletions quay.io/biocontainers/bioconductor-pairedgsea/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-pairedgsea
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-pairedgsea
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register-python-argcomplete: /usr/local/bin/register-python-argcomplete
python3.1: /usr/local/bin/python3.1
18 changes: 18 additions & 0 deletions quay.io/biocontainers/bioconductor-reusedata/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-reusedata
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-reusedata
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tjbench: /usr/local/bin/tjbench
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pandoc: /usr/local/bin/pandoc
30 changes: 30 additions & 0 deletions quay.io/biocontainers/bioconductor-scarray.sat/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-scarray.sat
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-scarray.sat
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yq: /usr/local/bin/yq
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onig-config: /usr/local/bin/onig-config
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register-python-argcomplete: /usr/local/bin/register-python-argcomplete
pandoc: /usr/local/bin/pandoc
python3.1: /usr/local/bin/python3.1
34 changes: 34 additions & 0 deletions quay.io/biocontainers/bioconductor-scfeatures/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-scfeatures
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-scfeatures
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dvipdf: /usr/local/bin/dvipdf
eps2eps: /usr/local/bin/eps2eps
gs: /usr/local/bin/gs
34 changes: 34 additions & 0 deletions quay.io/biocontainers/bioconductor-scrnaseqapp/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-scrnaseqapp
maintainer: '@vsoch'
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yq: /usr/local/bin/yq
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onig-config: /usr/local/bin/onig-config
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h5clear: /usr/local/bin/h5clear
h5format_convert: /usr/local/bin/h5format_convert
h5watch: /usr/local/bin/h5watch
26 changes: 26 additions & 0 deletions quay.io/biocontainers/bioconductor-sgcp/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-sgcp
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installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh
tomlq: /usr/local/bin/tomlq
xq: /usr/local/bin/xq
yq: /usr/local/bin/yq
jq: /usr/local/bin/jq
onig-config: /usr/local/bin/onig-config
activate-global-python-argcomplete: /usr/local/bin/activate-global-python-argcomplete
python-argcomplete-check-easy-install-script: /usr/local/bin/python-argcomplete-check-easy-install-script
register-python-argcomplete: /usr/local/bin/register-python-argcomplete
python3.1: /usr/local/bin/python3.1

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