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Automated deployment to update containers 2023-07-24 (#136)
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28 changes: 28 additions & 0 deletions quay.io/biocontainers/bioconductor-cbnplot/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-cbnplot
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-cbnplot
latest:
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tags:
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docker: quay.io/biocontainers/bioconductor-cbnplot
aliases:
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tjbench: /usr/local/bin/tjbench
glpsol: /usr/local/bin/glpsol
2to3-3.11: /usr/local/bin/2to3-3.11
idle3.11: /usr/local/bin/idle3.11
pydoc3.11: /usr/local/bin/pydoc3.11
python3.11: /usr/local/bin/python3.11
python3.11-config: /usr/local/bin/python3.11-config
installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh
tomlq: /usr/local/bin/tomlq
xq: /usr/local/bin/xq
yq: /usr/local/bin/yq
jq: /usr/local/bin/jq
onig-config: /usr/local/bin/onig-config
activate-global-python-argcomplete: /usr/local/bin/activate-global-python-argcomplete
python-argcomplete-check-easy-install-script: /usr/local/bin/python-argcomplete-check-easy-install-script
register-python-argcomplete: /usr/local/bin/register-python-argcomplete
pandoc: /usr/local/bin/pandoc
python3.1: /usr/local/bin/python3.1
29 changes: 29 additions & 0 deletions quay.io/biocontainers/bioconductor-cytofqc/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-cytofqc
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-cytofqc
latest:
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xq: /usr/local/bin/xq
yq: /usr/local/bin/yq
jq: /usr/local/bin/jq
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register-python-argcomplete: /usr/local/bin/register-python-argcomplete
pandoc: /usr/local/bin/pandoc
python3.1: /usr/local/bin/python3.1
42 changes: 42 additions & 0 deletions quay.io/biocontainers/bioconductor-cytoviewer/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-cytoviewer
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-cytoviewer
latest:
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26 changes: 26 additions & 0 deletions quay.io/biocontainers/bioconductor-gbscleanr/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-gbscleanr
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-gbscleanr
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pydoc3.11: /usr/local/bin/pydoc3.11
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jq: /usr/local/bin/jq
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register-python-argcomplete: /usr/local/bin/register-python-argcomplete
python3.1: /usr/local/bin/python3.1
26 changes: 26 additions & 0 deletions quay.io/biocontainers/bioconductor-ifaa/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-ifaa
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-ifaa
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python3.1: /usr/local/bin/python3.1
27 changes: 27 additions & 0 deletions quay.io/biocontainers/bioconductor-scmultiome/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-scmultiome
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-scmultiome
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33 changes: 33 additions & 0 deletions quay.io/biocontainers/bioconductor-seqarchrplus/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-seqarchrplus
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-seqarchrplus
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onig-config: /usr/local/bin/onig-config
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register-python-argcomplete: /usr/local/bin/register-python-argcomplete
pandoc: /usr/local/bin/pandoc
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27 changes: 27 additions & 0 deletions quay.io/biocontainers/bioconductor-svmdo/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-svmdo
maintainer: '@vsoch'
description: singularity registry hpc automated addition for bioconductor-svmdo
latest:
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docker: quay.io/biocontainers/bioconductor-svmdo
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xq: /usr/local/bin/xq
yq: /usr/local/bin/yq
jq: /usr/local/bin/jq
onig-config: /usr/local/bin/onig-config
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register-python-argcomplete: /usr/local/bin/register-python-argcomplete
python3.1: /usr/local/bin/python3.1
33 changes: 33 additions & 0 deletions quay.io/biocontainers/dimet/container.yaml
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url: https://biocontainers.pro/tools/dimet
maintainer: '@vsoch'
description: singularity registry hpc automated addition for dimet
latest:
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pyftsubset: /usr/local/bin/pyftsubset
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jpgicc: /usr/local/bin/jpgicc
linkicc: /usr/local/bin/linkicc
psicc: /usr/local/bin/psicc
tificc: /usr/local/bin/tificc
transicc: /usr/local/bin/transicc
python3.1: /usr/local/bin/python3.1
18 changes: 18 additions & 0 deletions quay.io/biocontainers/fastools/container.yaml
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url: https://biocontainers.pro/tools/fastools
maintainer: '@vsoch'
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59 changes: 59 additions & 0 deletions quay.io/biocontainers/gmwi2/container.yaml
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url: https://biocontainers.pro/tools/gmwi2
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poly.py: /usr/local/bin/poly.py
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raxmlHPC-SSE3: /usr/local/bin/raxmlHPC-SSE3
hwloc-gather-cpuid: /usr/local/bin/hwloc-gather-cpuid
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hwloc-patch: /usr/local/bin/hwloc-patch
hwloc-ps: /usr/local/bin/hwloc-ps
12 changes: 12 additions & 0 deletions quay.io/biocontainers/r-eztune/container.yaml
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url: https://biocontainers.pro/tools/r-eztune
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aliases:
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pandoc: /usr/local/bin/pandoc

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