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Automated deployment to update containers 2023-07-24 (#136)
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url: https://biocontainers.pro/tools/bioconductor-cbnplot | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for bioconductor-cbnplot | ||
latest: | ||
1.0.0--r43hdfd78af_0: sha256:65e1d7e76b656ce3a68624c170036f42136d877be6d4f79123d5adfa39249e2b | ||
tags: | ||
1.0.0--r43hdfd78af_0: sha256:65e1d7e76b656ce3a68624c170036f42136d877be6d4f79123d5adfa39249e2b | ||
docker: quay.io/biocontainers/bioconductor-cbnplot | ||
aliases: | ||
hb-info: /usr/local/bin/hb-info | ||
tjbench: /usr/local/bin/tjbench | ||
glpsol: /usr/local/bin/glpsol | ||
2to3-3.11: /usr/local/bin/2to3-3.11 | ||
idle3.11: /usr/local/bin/idle3.11 | ||
pydoc3.11: /usr/local/bin/pydoc3.11 | ||
python3.11: /usr/local/bin/python3.11 | ||
python3.11-config: /usr/local/bin/python3.11-config | ||
installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh | ||
tomlq: /usr/local/bin/tomlq | ||
xq: /usr/local/bin/xq | ||
yq: /usr/local/bin/yq | ||
jq: /usr/local/bin/jq | ||
onig-config: /usr/local/bin/onig-config | ||
activate-global-python-argcomplete: /usr/local/bin/activate-global-python-argcomplete | ||
python-argcomplete-check-easy-install-script: /usr/local/bin/python-argcomplete-check-easy-install-script | ||
register-python-argcomplete: /usr/local/bin/register-python-argcomplete | ||
pandoc: /usr/local/bin/pandoc | ||
python3.1: /usr/local/bin/python3.1 |
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url: https://biocontainers.pro/tools/bioconductor-cytofqc | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for bioconductor-cytofqc | ||
latest: | ||
1.0.0--r43hdfd78af_0: sha256:d99d9ba02032ae1ca63daa8fffa939d1856d80a1c2ef511c78ae7a84d7bf9afd | ||
tags: | ||
1.0.0--r43hdfd78af_0: sha256:d99d9ba02032ae1ca63daa8fffa939d1856d80a1c2ef511c78ae7a84d7bf9afd | ||
docker: quay.io/biocontainers/bioconductor-cytofqc | ||
aliases: | ||
f2py3.11: /usr/local/bin/f2py3.11 | ||
hb-info: /usr/local/bin/hb-info | ||
tjbench: /usr/local/bin/tjbench | ||
glpsol: /usr/local/bin/glpsol | ||
2to3-3.11: /usr/local/bin/2to3-3.11 | ||
idle3.11: /usr/local/bin/idle3.11 | ||
pydoc3.11: /usr/local/bin/pydoc3.11 | ||
python3.11: /usr/local/bin/python3.11 | ||
python3.11-config: /usr/local/bin/python3.11-config | ||
installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh | ||
tomlq: /usr/local/bin/tomlq | ||
xq: /usr/local/bin/xq | ||
yq: /usr/local/bin/yq | ||
jq: /usr/local/bin/jq | ||
onig-config: /usr/local/bin/onig-config | ||
activate-global-python-argcomplete: /usr/local/bin/activate-global-python-argcomplete | ||
python-argcomplete-check-easy-install-script: /usr/local/bin/python-argcomplete-check-easy-install-script | ||
register-python-argcomplete: /usr/local/bin/register-python-argcomplete | ||
pandoc: /usr/local/bin/pandoc | ||
python3.1: /usr/local/bin/python3.1 |
42 changes: 42 additions & 0 deletions
42
quay.io/biocontainers/bioconductor-cytoviewer/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-cytoviewer | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for bioconductor-cytoviewer | ||
latest: | ||
1.0.0--r43hdfd78af_0: sha256:2f4cdf8ca6aa149b78313445f911f9d1990c23307d29391620586aa179b7ea84 | ||
tags: | ||
1.0.0--r43hdfd78af_0: sha256:2f4cdf8ca6aa149b78313445f911f9d1990c23307d29391620586aa179b7ea84 | ||
docker: quay.io/biocontainers/bioconductor-cytoviewer | ||
aliases: | ||
elastipubsub5: /usr/local/bin/elastipubsub5 | ||
mqtt5_app: /usr/local/bin/mqtt5_app | ||
mqtt5_canary: /usr/local/bin/mqtt5_canary | ||
mqtt5canary: /usr/local/bin/mqtt5canary | ||
produce_x_platform_fuzz_corpus: /usr/local/bin/produce_x_platform_fuzz_corpus | ||
protoc-23.3.0: /usr/local/bin/protoc-23.3.0 | ||
run_x_platform_fuzz_corpus: /usr/local/bin/run_x_platform_fuzz_corpus | ||
sozip: /usr/local/bin/sozip | ||
elasticurl: /usr/local/bin/elasticurl | ||
elasticurl_cpp: /usr/local/bin/elasticurl_cpp | ||
elastipubsub: /usr/local/bin/elastipubsub | ||
pg_amcheck: /usr/local/bin/pg_amcheck | ||
h5delete: /usr/local/bin/h5delete | ||
bsdcat: /usr/local/bin/bsdcat | ||
bsdcpio: /usr/local/bin/bsdcpio | ||
bsdtar: /usr/local/bin/bsdtar | ||
pdfsig: /usr/local/bin/pdfsig | ||
gdal_create: /usr/local/bin/gdal_create | ||
gdal_viewshed: /usr/local/bin/gdal_viewshed | ||
gdalmdiminfo: /usr/local/bin/gdalmdiminfo | ||
gdalmdimtranslate: /usr/local/bin/gdalmdimtranslate | ||
sha256_profile: /usr/local/bin/sha256_profile | ||
pg_verifybackup: /usr/local/bin/pg_verifybackup | ||
pdfattach: /usr/local/bin/pdfattach | ||
applygeo: /usr/local/bin/applygeo | ||
geotifcp: /usr/local/bin/geotifcp | ||
gnmanalyse: /usr/local/bin/gnmanalyse | ||
gnmmanage: /usr/local/bin/gnmmanage | ||
kea-config: /usr/local/bin/kea-config | ||
listgeo: /usr/local/bin/listgeo | ||
makegeo: /usr/local/bin/makegeo | ||
pg_checksums: /usr/local/bin/pg_checksums | ||
projsync: /usr/local/bin/projsync |
26 changes: 26 additions & 0 deletions
26
quay.io/biocontainers/bioconductor-gbscleanr/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-gbscleanr | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for bioconductor-gbscleanr | ||
latest: | ||
1.4.4--r43hf17093f_0: sha256:a94b5d9ba38def6813676caffc9507a15bcc42c02dc6e4de9d81d56a709c2671 | ||
tags: | ||
1.4.4--r43hf17093f_0: sha256:a94b5d9ba38def6813676caffc9507a15bcc42c02dc6e4de9d81d56a709c2671 | ||
docker: quay.io/biocontainers/bioconductor-gbscleanr | ||
aliases: | ||
hb-info: /usr/local/bin/hb-info | ||
tjbench: /usr/local/bin/tjbench | ||
2to3-3.11: /usr/local/bin/2to3-3.11 | ||
idle3.11: /usr/local/bin/idle3.11 | ||
pydoc3.11: /usr/local/bin/pydoc3.11 | ||
python3.11: /usr/local/bin/python3.11 | ||
python3.11-config: /usr/local/bin/python3.11-config | ||
installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh | ||
tomlq: /usr/local/bin/tomlq | ||
xq: /usr/local/bin/xq | ||
yq: /usr/local/bin/yq | ||
jq: /usr/local/bin/jq | ||
onig-config: /usr/local/bin/onig-config | ||
activate-global-python-argcomplete: /usr/local/bin/activate-global-python-argcomplete | ||
python-argcomplete-check-easy-install-script: /usr/local/bin/python-argcomplete-check-easy-install-script | ||
register-python-argcomplete: /usr/local/bin/register-python-argcomplete | ||
python3.1: /usr/local/bin/python3.1 |
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url: https://biocontainers.pro/tools/bioconductor-ifaa | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for bioconductor-ifaa | ||
latest: | ||
1.2.0--r43hdfd78af_0: sha256:fac7507ae7a9f0425ac729be23046815e55e2aaffe201f09ad41f78223d4ddec | ||
tags: | ||
1.2.0--r43hdfd78af_0: sha256:fac7507ae7a9f0425ac729be23046815e55e2aaffe201f09ad41f78223d4ddec | ||
docker: quay.io/biocontainers/bioconductor-ifaa | ||
aliases: | ||
hb-info: /usr/local/bin/hb-info | ||
tjbench: /usr/local/bin/tjbench | ||
2to3-3.11: /usr/local/bin/2to3-3.11 | ||
idle3.11: /usr/local/bin/idle3.11 | ||
pydoc3.11: /usr/local/bin/pydoc3.11 | ||
python3.11: /usr/local/bin/python3.11 | ||
python3.11-config: /usr/local/bin/python3.11-config | ||
installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh | ||
tomlq: /usr/local/bin/tomlq | ||
xq: /usr/local/bin/xq | ||
yq: /usr/local/bin/yq | ||
jq: /usr/local/bin/jq | ||
onig-config: /usr/local/bin/onig-config | ||
activate-global-python-argcomplete: /usr/local/bin/activate-global-python-argcomplete | ||
python-argcomplete-check-easy-install-script: /usr/local/bin/python-argcomplete-check-easy-install-script | ||
register-python-argcomplete: /usr/local/bin/register-python-argcomplete | ||
python3.1: /usr/local/bin/python3.1 |
27 changes: 27 additions & 0 deletions
27
quay.io/biocontainers/bioconductor-scmultiome/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-scmultiome | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for bioconductor-scmultiome | ||
latest: | ||
1.0.0--r43hdfd78af_0: sha256:6d38d04a988919c6f36a92f6e45c3fea6546029df3f587ae005354dd06ccdac1 | ||
tags: | ||
1.0.0--r43hdfd78af_0: sha256:6d38d04a988919c6f36a92f6e45c3fea6546029df3f587ae005354dd06ccdac1 | ||
docker: quay.io/biocontainers/bioconductor-scmultiome | ||
aliases: | ||
hb-info: /usr/local/bin/hb-info | ||
tjbench: /usr/local/bin/tjbench | ||
2to3-3.11: /usr/local/bin/2to3-3.11 | ||
idle3.11: /usr/local/bin/idle3.11 | ||
pydoc3.11: /usr/local/bin/pydoc3.11 | ||
python3.11: /usr/local/bin/python3.11 | ||
python3.11-config: /usr/local/bin/python3.11-config | ||
installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh | ||
tomlq: /usr/local/bin/tomlq | ||
xq: /usr/local/bin/xq | ||
yq: /usr/local/bin/yq | ||
jq: /usr/local/bin/jq | ||
onig-config: /usr/local/bin/onig-config | ||
activate-global-python-argcomplete: /usr/local/bin/activate-global-python-argcomplete | ||
python-argcomplete-check-easy-install-script: /usr/local/bin/python-argcomplete-check-easy-install-script | ||
register-python-argcomplete: /usr/local/bin/register-python-argcomplete | ||
pandoc: /usr/local/bin/pandoc | ||
python3.1: /usr/local/bin/python3.1 |
33 changes: 33 additions & 0 deletions
33
quay.io/biocontainers/bioconductor-seqarchrplus/container.yaml
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url: https://biocontainers.pro/tools/bioconductor-seqarchrplus | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for bioconductor-seqarchrplus | ||
latest: | ||
1.0.0--r43hdfd78af_0: sha256:58632c882731971c8223e2f2b4da4cecfa812b079746d1786b35aab8397d22e3 | ||
tags: | ||
1.0.0--r43hdfd78af_0: sha256:58632c882731971c8223e2f2b4da4cecfa812b079746d1786b35aab8397d22e3 | ||
docker: quay.io/biocontainers/bioconductor-seqarchrplus | ||
aliases: | ||
f2py3.11: /usr/local/bin/f2py3.11 | ||
hb-info: /usr/local/bin/hb-info | ||
tjbench: /usr/local/bin/tjbench | ||
fftw-wisdom: /usr/local/bin/fftw-wisdom | ||
fftw-wisdom-to-conf: /usr/local/bin/fftw-wisdom-to-conf | ||
fftwf-wisdom: /usr/local/bin/fftwf-wisdom | ||
fftwl-wisdom: /usr/local/bin/fftwl-wisdom | ||
glpsol: /usr/local/bin/glpsol | ||
2to3-3.11: /usr/local/bin/2to3-3.11 | ||
idle3.11: /usr/local/bin/idle3.11 | ||
pydoc3.11: /usr/local/bin/pydoc3.11 | ||
python3.11: /usr/local/bin/python3.11 | ||
python3.11-config: /usr/local/bin/python3.11-config | ||
installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh | ||
tomlq: /usr/local/bin/tomlq | ||
xq: /usr/local/bin/xq | ||
yq: /usr/local/bin/yq | ||
jq: /usr/local/bin/jq | ||
onig-config: /usr/local/bin/onig-config | ||
activate-global-python-argcomplete: /usr/local/bin/activate-global-python-argcomplete | ||
python-argcomplete-check-easy-install-script: /usr/local/bin/python-argcomplete-check-easy-install-script | ||
register-python-argcomplete: /usr/local/bin/register-python-argcomplete | ||
pandoc: /usr/local/bin/pandoc | ||
python3.1: /usr/local/bin/python3.1 |
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---|---|---|
@@ -0,0 +1,27 @@ | ||
url: https://biocontainers.pro/tools/bioconductor-svmdo | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for bioconductor-svmdo | ||
latest: | ||
1.0.0--r43hdfd78af_0: sha256:09d06e876b2bdf0203628216ef34b105a62ee94ed2651c9f00b56c5838ef4fc6 | ||
tags: | ||
1.0.0--r43hdfd78af_0: sha256:09d06e876b2bdf0203628216ef34b105a62ee94ed2651c9f00b56c5838ef4fc6 | ||
docker: quay.io/biocontainers/bioconductor-svmdo | ||
aliases: | ||
git2: /usr/local/bin/git2 | ||
hb-info: /usr/local/bin/hb-info | ||
tjbench: /usr/local/bin/tjbench | ||
2to3-3.11: /usr/local/bin/2to3-3.11 | ||
idle3.11: /usr/local/bin/idle3.11 | ||
pydoc3.11: /usr/local/bin/pydoc3.11 | ||
python3.11: /usr/local/bin/python3.11 | ||
python3.11-config: /usr/local/bin/python3.11-config | ||
installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh | ||
tomlq: /usr/local/bin/tomlq | ||
xq: /usr/local/bin/xq | ||
yq: /usr/local/bin/yq | ||
jq: /usr/local/bin/jq | ||
onig-config: /usr/local/bin/onig-config | ||
activate-global-python-argcomplete: /usr/local/bin/activate-global-python-argcomplete | ||
python-argcomplete-check-easy-install-script: /usr/local/bin/python-argcomplete-check-easy-install-script | ||
register-python-argcomplete: /usr/local/bin/register-python-argcomplete | ||
python3.1: /usr/local/bin/python3.1 |
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---|---|---|
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url: https://biocontainers.pro/tools/dimet | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for dimet | ||
latest: | ||
0.1.0--pyhdfd78af_0: sha256:a993b30cda1a57e963612a68fd991e958fa2baeacba9227e848b37cfa6f2185b | ||
tags: | ||
0.1.0--pyhdfd78af_0: sha256:a993b30cda1a57e963612a68fd991e958fa2baeacba9227e848b37cfa6f2185b | ||
docker: quay.io/biocontainers/dimet | ||
aliases: | ||
dotenv: /usr/local/bin/dotenv | ||
pygrun: /usr/local/bin/pygrun | ||
coverage: /usr/local/bin/coverage | ||
f2py3.11: /usr/local/bin/f2py3.11 | ||
tjbench: /usr/local/bin/tjbench | ||
2to3-3.11: /usr/local/bin/2to3-3.11 | ||
idle3.11: /usr/local/bin/idle3.11 | ||
pydoc3.11: /usr/local/bin/pydoc3.11 | ||
python3.11: /usr/local/bin/python3.11 | ||
python3.11-config: /usr/local/bin/python3.11-config | ||
fonttools: /usr/local/bin/fonttools | ||
pyftmerge: /usr/local/bin/pyftmerge | ||
pyftsubset: /usr/local/bin/pyftsubset | ||
ttx: /usr/local/bin/ttx | ||
brotli: /usr/local/bin/brotli | ||
opj_compress: /usr/local/bin/opj_compress | ||
opj_decompress: /usr/local/bin/opj_decompress | ||
opj_dump: /usr/local/bin/opj_dump | ||
jpgicc: /usr/local/bin/jpgicc | ||
linkicc: /usr/local/bin/linkicc | ||
psicc: /usr/local/bin/psicc | ||
tificc: /usr/local/bin/tificc | ||
transicc: /usr/local/bin/transicc | ||
python3.1: /usr/local/bin/python3.1 |
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---|---|---|
@@ -0,0 +1,18 @@ | ||
url: https://biocontainers.pro/tools/fastools | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for fastools | ||
latest: | ||
1.1.5--pyh7cba7a3_0: sha256:56287f35c8985b8221a670a56624959a0530af762ccfee5d2b18e9c3409dbd0c | ||
tags: | ||
1.1.5--pyh7cba7a3_0: sha256:56287f35c8985b8221a670a56624959a0530af762ccfee5d2b18e9c3409dbd0c | ||
docker: quay.io/biocontainers/fastools | ||
aliases: | ||
fastools: /usr/local/bin/fastools | ||
split_fasta: /usr/local/bin/split_fasta | ||
f2py3.11: /usr/local/bin/f2py3.11 | ||
2to3-3.11: /usr/local/bin/2to3-3.11 | ||
idle3.11: /usr/local/bin/idle3.11 | ||
pydoc3.11: /usr/local/bin/pydoc3.11 | ||
python3.11: /usr/local/bin/python3.11 | ||
python3.11-config: /usr/local/bin/python3.11-config | ||
python3.1: /usr/local/bin/python3.1 |
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url: https://biocontainers.pro/tools/gmwi2 | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for gmwi2 | ||
latest: | ||
1.4--pyhdfd78af_0: sha256:e6a5e094cd33856dd5af6f7b2328abf7571df5b54eed80b77b5ec294af2d9dd5 | ||
tags: | ||
1.4--pyhdfd78af_0: sha256:e6a5e094cd33856dd5af6f7b2328abf7571df5b54eed80b77b5ec294af2d9dd5 | ||
docker: quay.io/biocontainers/gmwi2 | ||
aliases: | ||
add_metadata_tree.py: /usr/local/bin/add_metadata_tree.py | ||
blastn_vdb: /usr/local/bin/blastn_vdb | ||
breadth_depth.py: /usr/local/bin/breadth_depth.py | ||
consensus.py: /usr/local/bin/consensus.py | ||
consensus_aDNA.py: /usr/local/bin/consensus_aDNA.py | ||
extract_markers.py: /usr/local/bin/extract_markers.py | ||
gmwi2: /usr/local/bin/gmwi2 | ||
merge_metaphlan_tables.py: /usr/local/bin/merge_metaphlan_tables.py | ||
metaphlan: /usr/local/bin/metaphlan | ||
phylophlan: /usr/local/bin/phylophlan | ||
phylophlan_draw_metagenomic: /usr/local/bin/phylophlan_draw_metagenomic | ||
phylophlan_get_reference: /usr/local/bin/phylophlan_get_reference | ||
phylophlan_metagenomic: /usr/local/bin/phylophlan_metagenomic | ||
phylophlan_setup_database: /usr/local/bin/phylophlan_setup_database | ||
phylophlan_strain_finder: /usr/local/bin/phylophlan_strain_finder | ||
phylophlan_write_config_file: /usr/local/bin/phylophlan_write_config_file | ||
phylophlan_write_default_configs.sh: /usr/local/bin/phylophlan_write_default_configs.sh | ||
plot_tree_graphlan.py: /usr/local/bin/plot_tree_graphlan.py | ||
poly.py: /usr/local/bin/poly.py | ||
polymut.py: /usr/local/bin/polymut.py | ||
read_fastx.py: /usr/local/bin/read_fastx.py | ||
sample2markers.py: /usr/local/bin/sample2markers.py | ||
strain_transmission.py: /usr/local/bin/strain_transmission.py | ||
strainphlan: /usr/local/bin/strainphlan | ||
tblastn_vdb: /usr/local/bin/tblastn_vdb | ||
iqtree2: /usr/local/bin/iqtree2 | ||
readal: /usr/local/bin/readal | ||
statal: /usr/local/bin/statal | ||
trimal: /usr/local/bin/trimal | ||
h5delete: /usr/local/bin/h5delete | ||
iqtree: /usr/local/bin/iqtree | ||
biom: /usr/local/bin/biom | ||
raxmlHPC: /usr/local/bin/raxmlHPC | ||
raxmlHPC-AVX2: /usr/local/bin/raxmlHPC-AVX2 | ||
raxmlHPC-PTHREADS: /usr/local/bin/raxmlHPC-PTHREADS | ||
raxmlHPC-PTHREADS-AVX2: /usr/local/bin/raxmlHPC-PTHREADS-AVX2 | ||
raxmlHPC-PTHREADS-SSE3: /usr/local/bin/raxmlHPC-PTHREADS-SSE3 | ||
raxmlHPC-SSE3: /usr/local/bin/raxmlHPC-SSE3 | ||
hwloc-gather-cpuid: /usr/local/bin/hwloc-gather-cpuid | ||
hwloc-annotate: /usr/local/bin/hwloc-annotate | ||
hwloc-bind: /usr/local/bin/hwloc-bind | ||
hwloc-calc: /usr/local/bin/hwloc-calc | ||
hwloc-compress-dir: /usr/local/bin/hwloc-compress-dir | ||
hwloc-diff: /usr/local/bin/hwloc-diff | ||
hwloc-distrib: /usr/local/bin/hwloc-distrib | ||
hwloc-gather-topology: /usr/local/bin/hwloc-gather-topology | ||
hwloc-info: /usr/local/bin/hwloc-info | ||
hwloc-ls: /usr/local/bin/hwloc-ls | ||
hwloc-patch: /usr/local/bin/hwloc-patch | ||
hwloc-ps: /usr/local/bin/hwloc-ps |
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url: https://biocontainers.pro/tools/r-eztune | ||
maintainer: '@vsoch' | ||
description: singularity registry hpc automated addition for r-eztune | ||
latest: | ||
3.1.1--r43h3121a25_0: sha256:48ef0b6e171ec347d6c72a7b367a596a9ebbdf7dca51b2597b8c3210ce2e624f | ||
tags: | ||
3.1.1--r43h3121a25_0: sha256:48ef0b6e171ec347d6c72a7b367a596a9ebbdf7dca51b2597b8c3210ce2e624f | ||
docker: quay.io/biocontainers/r-eztune | ||
aliases: | ||
hb-info: /usr/local/bin/hb-info | ||
tjbench: /usr/local/bin/tjbench | ||
pandoc: /usr/local/bin/pandoc |