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remove deprecated symlink-tree
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Signed-off-by: vsoch <vsoch@users.noreply.github.com>
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vsoch committed Apr 16, 2022
1 parent cc0a225 commit 4a7ab2f
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Showing 2 changed files with 6 additions and 5 deletions.
9 changes: 5 additions & 4 deletions .github/workflows/test.yml
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Expand Up @@ -102,11 +102,12 @@ jobs:
rm test_output
shpc uninstall --force python:3.9.5-alpine
# Try creating symlink install
# Try creating views install
mkdir -p tmp-modules
shpc config set symlink_base:tmp-modules
shpc install python:3.9.5-alpine --symlink-tree
shpc config set views_base:tmp-modules
shpc view create noodles
shpc install --view noodles python:3.9.5-alpine
- name: Run python module tests (tcsh)
shell: tcsh -e {0}
run: |
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2 changes: 1 addition & 1 deletion docs/getting_started/user-guide.rst
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Expand Up @@ -56,7 +56,7 @@ Or set a configuration value on the fly for any command:

.. code-block:: console
$ shpc install -c set:symlink_base:/tmp/modules biocontainers/samtools
$ shpc install -c set:views_base:/tmp/views biocontainers/samtools
The above assumes that you've installed the software, and have already
added the modules folder to be seen by your module software. If your module
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