Package not available for R version 4.1: package 'threadr' is not available for this version of R

[kamaulindhardt]

Error in str_replace(., "\\..$", "") : 
  could not find function "str_replace"
Calls: <Anonymous> ... tbl_vars_dispatch -> rename_at -> vars_select_syms -> set_names -> .fn
In addition: Warning messages:
1: package 'threadr' is not available for this version of R

Error in loadNamespace(x) : there is no package called ‘threadr’

I got this error after trying to install the threadr package. Any developmental versions of the package I could install instead?

For your info:

> sessionInfo()
R version 4.1.1 (2021-08-10)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Big Sur 11.4

Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods  
[7] base     

other attached packages:
 [1] stringr_1.4.0       ERAg_0.0.1.0000     ranger_0.13.1      
 [4] spatialsample_0.1.0 visdat_0.5.3        vip_0.3.2          
 [7] finetune_0.1.0      stacks_0.2.1        yardstick_0.0.8    
[10] workflowsets_0.1.0  workflows_0.2.3     tune_0.1.6         
[13] tidyr_1.1.3         tibble_3.1.4        rsample_0.1.0      
[16] recipes_0.1.16      purrr_0.3.4         parsnip_0.1.7      
[19] modeldata_0.1.1     infer_1.0.0         dplyr_1.0.7        
[22] dials_0.0.9         scales_1.1.1        broom_0.7.9        
[25] tidymodels_0.1.3    Boruta_7.0.0        patchwork_1.1.1    
[28] superheat_0.1.0     gstat_2.0-7         DataExplorer_0.8.2 
[31] ggfortify_0.4.12    ggbeeswarm_0.6.0    rcompanion_2.4.1   
[34] report_0.3.5        ggridges_0.5.3      GGally_2.1.2       
[37] corrr_0.4.3         ruler_0.2.4         RColorBrewer_1.1-2 
[40] see_0.6.7           hablar_0.3.0        skimr_2.1.3        
[43] dotwhisker_0.7.3    ggplot2_3.3.5       broom.mixed_0.2.7  
[46] readr_2.0.1         pillar_1.6.2        treemap_2.4-3      
[49] lme4_1.1-27.1       Matrix_1.3-4        ggExtra_0.9        
[52] DT_0.18             kableExtra_1.3.4    data.table_1.14.0  
[55] knitr_1.33          pacman_0.5.1        cowplot_1.1.1      
[58] here_1.0.1         

loaded via a namespace (and not attached):
  [1] spam_2.7-0           coin_1.4-1           nortest_1.0-4       
  [4] remotes_2.4.0        lattice_0.20-44      spatstat.utils_2.2-0
  [7] expm_0.999-6         vctrs_0.3.8          stats4_4.1.1        
 [10] utf8_1.2.2           withr_2.4.2          foreign_0.8-81      
 [13] lhs_1.1.1            lifecycle_1.0.0      matrixStats_0.60.1  
 [16] rgeos_0.5-5          munsell_0.5.0        codetools_0.2-18    
 [19] lmtest_0.9-38        furrr_0.2.3          magick_2.7.3        
 [22] parallelly_1.27.0    fs_1.5.0             stringi_1.7.3       
 [25] grid_4.1.1           polyclip_1.10-0      sandwich_3.0-1      
 [28] cluster_2.1.2        pkgconfig_2.0.3      prettyunits_1.1.1   
 [31] lubridate_1.7.10     httr_1.4.2           GPfit_1.0-8         
 [34] igraph_1.2.6         circular_0.4-93      modeltools_0.2-23   
 [37] haven_2.4.3          parameters_0.14.0    htmltools_0.5.2     
 [40] miniUI_0.1.1.1       viridisLite_0.4.0    usethis_2.0.1       
 [43] yaml_2.2.1           prodlim_2019.11.13   hexbin_1.28.2       
 [46] jquerylib_0.1.4      later_1.3.0          glue_1.4.2          
 [49] DBI_1.1.1            plyr_1.8.6           foreach_1.5.1       
 [52] dotCall64_1.0-1      gtable_0.3.0         latticeExtra_0.6-29 
 [55] fastmap_1.1.0        checkmate_2.0.0      promises_1.2.0.1    
 [58] webshot_0.5.2        FNN_1.1.3            distill_1.2         
 [61] hms_1.1.0            png_0.1-7            DescTools_0.99.42   
 [64] Formula_1.2-4        crayon_1.4.1         downlit_0.2.1       
 [67] gridBase_0.4-7       svglite_2.0.0        boot_1.3-28         
 [70] tidyselect_1.1.1     xfun_0.25            performance_0.7.3   
 [73] splines_4.1.1        spacetime_1.2-5      survival_3.2-13     
 [76] rootSolve_1.8.2.2    networkD3_0.4        jpeg_0.1-9          
 [79] fields_12.5          ggsignif_0.6.2       htmlTable_2.2.1     
 [82] xtable_1.8-4         cachem_1.0.6         ipred_0.9-11        
 [85] systemfonts_1.0.2    mime_0.11            gld_2.6.2           
 [88] processx_3.5.2       insight_0.14.3       numDeriv_2016.8-1.1 
 [91] tools_4.1.1          cli_3.0.1            magrittr_2.0.1      
 [94] proxy_0.4-26         rworldxtra_1.01      libcoin_1.0-8       
 [97] ggstance_0.3.5       repr_1.1.3           lmerTest_3.1-3      
[100] s2_1.0.6             effectsize_0.4.5     multcomp_1.4-17     
[103] zip_2.2.0            bayestestR_0.10.5    devtools_2.4.2      
[106] tzdb_0.1.2           ps_1.6.0             lmom_2.8            
[109] maptools_1.1-1       fansi_0.5.0          xts_0.12.1          
[112] TH.data_1.0-10       KernSmooth_2.23-20   backports_1.2.1     
[115] farver_2.1.0         openxlsx_4.2.4       shiny_1.6.0         
[118] hardhat_0.1.6        sass_0.4.0           maps_3.3.0          
[121] rsconnect_0.8.24     pROC_1.17.0.1        viridis_0.6.1       
[124] rstudioapi_0.13      minqa_1.2.4          iterators_1.0.13    
[127] spatstat.geom_2.2-2  intervals_0.15.2     nlme_3.1-152        
[130] beeswarm_0.4.0       bslib_0.2.5.1        sf_1.0-2            
[133] listenv_0.8.0        generics_0.1.0       colorspace_2.0-2    
[136] base64enc_0.1-3      pkgbuild_1.2.0       e1071_1.7-8         
[139] spatstat.data_2.1-0  sp_1.4-5             timeDate_3043.102   
[142] evaluate_0.14        memoise_2.0.0        coda_0.19-4         
[145] vipor_0.4.5          httpuv_1.6.2         class_7.3-19        
[148] Rcpp_1.0.7           BiocManager_1.30.16  classInt_0.4-3      
[151] pkgload_1.2.1        jsonlite_1.7.2       Hmisc_4.5-0         
[154] digest_0.6.27        rprojroot_2.0.2      rmarkdown_2.10      
[157] butcher_0.1.5        globals_0.14.0       compiler_4.1.1      
[160] nnet_7.3-16          zoo_1.8-9            testthat_3.0.4      
[163] keyholder_0.1.5      rlang_0.4.11         nloptr_1.2.2.2      
[166] wk_0.5.0             sessioninfo_1.1.1    lava_1.6.9          
[169] multcompView_0.1-8   rvest_1.0.1          future_1.22.1       
[172] mvtnorm_1.1-2        htmlwidgets_1.5.3    labeling_0.4.2      
[175] forcats_0.5.1        callr_3.7.0          datawizard_0.2.0    
[178] curl_4.3.2           parallel_4.1.1       rworldmap_1.3-6     
[181] highr_0.9            desc_1.3.0           deldir_0.2-10       
[184] gridExtra_2.3        Exact_2.1            diagis_0.1.5        
[187] DiceDesign_1.9       MASS_7.3-54          ellipsis_0.3.2      
[190] xml2_1.3.2           gower_0.2.2          reshape_0.8.8       
[193] rpart_4.1-15         R6_2.5.1             units_0.7-2   

[skgrange]

Hello,
It looks like you have a rather odd error there. I would recommend restarting your R session and reinstalling threadr again. You may need to install stringr again too if you are having issues finding the str_replace function. Because you are running the R 4.1.1, a rather recent version, I suspect the upgrade has not been applied perfectly.

# Install stringr
install.packages("stringr")

# Install threadr
remotes::install_github("skgrange/threadr")

I hope this solves your issue!
Stuart.