Re-generated documentation

docs/Makefile

@@ -5,14 +5,14 @@
 SPHINXOPTS    =
 SPHINXBUILD   = sphinx-build
 PAPER         =
-BUILDDIR      = _build
+BUILDDIR      = build
 
 # Internal variables.
 PAPEROPT_a4     = -D latex_paper_size=a4
 PAPEROPT_letter = -D latex_paper_size=letter
-ALLSPHINXOPTS   = -d $(BUILDDIR)/doctrees $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) .
+ALLSPHINXOPTS   = -d $(BUILDDIR)/doctrees $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) source
 # the i18n builder cannot share the environment and doctrees with the others
-I18NSPHINXOPTS  = $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) .
+I18NSPHINXOPTS  = $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) source
 
 .PHONY: help
 help:

docs/source/biota.rst

@@ -0,0 +1,38 @@
+biota package
+=============
+
+Submodules
+----------
+
+biota.calibration module
+------------------------
+
+.. automodule:: biota.calibration
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+biota.change2 module
+--------------------
+
+.. automodule:: biota.change2
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+biota.download module
+---------------------
+
+.. automodule:: biota.download
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
+
+Module contents
+---------------
+
+.. automodule:: biota
+    :members:
+    :undoc-members:
+    :show-inheritance: