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All Quantified Peaks Reader #788

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merged 6 commits into from
Jul 23, 2024

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nbollis
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@nbollis nbollis commented Jul 11, 2024

Added in a class to read in our all quantified peaks output from FlashLFQ

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codecov bot commented Jul 11, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 75.43%. Comparing base (7ec999f) to head (f492f6c).

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@@            Coverage Diff             @@
##           master     #788      +/-   ##
==========================================
+ Coverage   75.38%   75.43%   +0.04%     
==========================================
  Files         199      201       +2     
  Lines       30655    30716      +61     
  Branches     3079     3086       +7     
==========================================
+ Hits        23110    23171      +61     
  Misses       7026     7026              
  Partials      519      519              
Files Coverage Δ
...ib/Readers/QuantificationResults/QuantifiedPeak.cs 100.00% <100.00%> (ø)
...eaders/QuantificationResults/QuantifiedPeakFile.cs 100.00% <100.00%> (ø)
mzLib/Readers/Util/Converters.cs 95.29% <100.00%> (+0.62%) ⬆️
mzLib/Readers/Util/SupportedFileTypes.cs 97.50% <100.00%> (+0.09%) ⬆️

trishorts
trishorts previously approved these changes Jul 12, 2024
elaboy
elaboy previously approved these changes Jul 15, 2024
@nbollis nbollis dismissed stale reviews from elaboy and trishorts via 283363c July 19, 2024 18:59
@trishorts trishorts merged commit e3ecd5a into smith-chem-wisc:master Jul 23, 2024
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elaboy pushed a commit to elaboy/mzLib-Fork that referenced this pull request Aug 5, 2024
* Added in a file to read all quantified peaks into readers and wrote initial tests

* expanded test coverage

* changed ms2retention time to nullable so that mbr peaks do not break the reader
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4 participants