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Adaptor content is 0 unless we specify --adapters #16

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edgardomortiz opened this issue Sep 3, 2021 · 3 comments
Closed

Adaptor content is 0 unless we specify --adapters #16

edgardomortiz opened this issue Sep 3, 2021 · 3 comments
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@edgardomortiz
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edgardomortiz commented Sep 3, 2021

Thanks for the program, we had been looking for a faster replacement for FastQC.

However, in a default run with falco 0.2.4 (from bioconda), the Adaptor Content plot is empty unless we add --adapters and the path to the adapter list file (which by the way seems not to be shipped in the conda installation, but I may be wrong on that).

Edgardo

@guilhermesena1 guilhermesena1 added the bug Something isn't working label Sep 8, 2021
@guilhermesena1
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ok I could reproduce the problem you were referring to! It was a very silly bug that slipped under the radar for me. This should be fixed at f035b2e . Thank you so much for providing the data it was very helpful to find those problems!

@edgardomortiz
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Excellent and thanks for the quick response!

@guilhermesena1
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I'll close this issue for now but feel free to reopen if you run into any problems related to this topic.

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