| _ ()| | / | __ )| | / ) ( __ ) | | | | / | | | |/| | _ | | / / | | | | | || | _ \ || | | | |) | |___ / /_ | || | |/||/|| ||____/|| /|()(__)
This fork of DisEMBL v1.4 represents a significant rewriting of the code without changing the scores/regions identified as disordered.
Much of the Python code is revised. TISEAN's Savitzky–Golay filter is replaced by Scipy's since it ends up being faster (no stdin/stdout necessary). C code is wrapped directly instead of through stdin/out and subprocess. These changes result in significant speed increase and will future simplify maintenance.
Originally - Copyright (C) 2004 Rune Linding & Lars Juhl Jensen - EMBL
Rewrite (v2.0+) - Copyright (C) 2016 Shyam Saladi & Nadine Bradbury - Caltech
- Clone repo
git clone git@github.com:smsaladi/disembl.git
- Install with
pip
cd disembl
pip install .
- If you've already installed the package and want to reinstall, try
pip install . -I
All dependencies should be checked for and, if necessary, installed
automatically by pip
.
The DisEMBL is licensed under the [GNU General Public License Version 2] (https://opensource.org/licenses/GPL-2.0).
-
Reconcile package requirements in
requirements.txt
with those listed atinstall_requires
,setup_requires
, andtest_requires
insetup.py
. -
Confirm build passes all tests
-
Update the version number and
download_url
insetup.py
-
Tag a release on GitHub with the new version number