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Adding new peak quality metrics to findChromPeaks for CentWave #343

Adding new peak quality metrics to findChromPeaks for CentWave

Adding new peak quality metrics to findChromPeaks for CentWave #343

Triggered via pull request July 31, 2023 20:02
Status Failure
Total duration 50m 38s
Artifacts 3

check-bioc.yml

on: pull_request
Matrix: build-check
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15 errors and 18 warnings
macOS-latest (4.3)
Running examples in ‘xcms-Ex.R’ failed
macOS-latest (4.3)
Running examples in ‘xcms-Ex.R’ failed
macOS-latest (4.3)
R CMD check found ERRORs
macOS-latest (4.3)
BiocParallel errors
macOS-latest (4.3)
unused argument (verboseBetaColumns = FALSE)
macOS-latest (4.3)
Test failures
macOS-latest (4.3)
Process completed with exit code 1.
ubuntu-latest (devel)
Process completed with exit code 1.
windows-latest (4.3)
Running examples in 'xcms-Ex.R' failed
windows-latest (4.3)
Running examples in 'xcms-Ex.R' failed
windows-latest (4.3)
R CMD check found ERRORs
windows-latest (4.3)
BiocParallel errors
windows-latest (4.3)
unused argument (verboseBetaColumns = FALSE)
windows-latest (4.3)
Test failures
windows-latest (4.3)
Process completed with exit code 1.
macOS-latest (4.3)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
macOS-latest (4.3)
Codoc mismatches from documentation object 'do_findChromPeaks_centWave':
macOS-latest (4.3)
Codoc mismatches from documentation object 'do_findChromPeaks_centWave':
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
multiple methods tables found for ‘uniqueMsLevels’
macOS-latest (4.3)
multiple methods tables found for ‘uniqueMsLevels’
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
macOS-latest (4.3)
unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.3:
ubuntu-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
windows-latest (4.3)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
windows-latest (4.3)
multiple methods tables found for 'uniqueMsLevels'
windows-latest (4.3)
multiple methods tables found for 'uniqueMsLevels'
windows-latest (4.3)
this package has a non-empty 'configure.win' file,
windows-latest (4.3)
Codoc mismatches from documentation object 'do_findChromPeaks_centWave':
windows-latest (4.3)
Codoc mismatches from documentation object 'do_findChromPeaks_centWave':

Artifacts

Produced during runtime
Name Size
Linux-biocversion-devel-r-devel-results Expired
60.1 MB
Windows-biocversion-devel-r-devel-results Expired
40.3 MB
macOS-biocversion-devel-r-devel-results Expired
57.5 MB